| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2468 |
|---|
| Symbol | glpT |
|---|
| ID | 6486804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2390367 |
|---|
| End bp | 2391725 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642737803 |
|---|
| Product | sn-glycerol-3-phosphate transporter |
|---|
| Protein accession | YP_002041544 |
|---|
| Protein GI | 194443850 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00712] glycerol-3-phosphate transporter
[TIGR00881] phosphoglycerate transporter family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 0.0862405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAGTA TTTTTAAACC AGCGCCGCAT AAAGCGCGCT TGCCAGCGGC GGAGATTGAT
CCGACCTATC GCCGATTACG CTGGCAGATT TTCCTGGGGA TATTCTTTGG CTATGCCGCG
TATTATCTGG TGCGCAAGAA CTTTGCTCTC GCGATGCCCT ACCTGGTAGA ACAGGGTTTT
TCACGCGGCG ATCTGGGCTT TGCGCTGTCC GGGATTTCCA TCGCTTATGG TTTTTCGAAA
TTTATAATGG GTTCGGTGTC CGATCGCTCG AATCCGCGCG TTTTTCTGCC GGCAGGGTTG
ATTCTGGCCG CAGCAGTCAT GTTGTTTATG GGCTTTGTGC CGTGGGCGAC ATCCAGCATC
GCCGTGATGT TTGTACTGTT GTTCCTTTGC GGCTGGTTCC AGGGGATGGG GTGGCCGCCG
TGCGGTCGTA CGATGGTTCA CTGGTGGTCG CAGAAAGAGC GCGGCGGCAT TGTGTCGGTC
TGGAACTGCG CGCATAACGT CGGCGGCGGG ATCCCGCCAC TGCTGTTCCT GCTGGGGATG
GCTTGGTTTA ACGACTGGAA AGCGGCGCTC TATATGCCAG CCTTTGGCGC GATTGTGGTG
GCGCTGTTCG CTTTCGCAAT GATGCGCGAT ACGCCGCAAT CCTGCGGTCT GCCGCCTATC
GAAGAGTATA AAAACGACTA TCCGGACGAC TACAACGAAA AAGCGGAAGA AGAGCTGACT
GCGAAGCAGA TCTTCATGCA GTACGTACTG CCAAACAAAC TGTTGTGGTA CATCGCTATC
GCCAACGTGT TTGTTTATCT GCTGCGCTAC GGTATTCTCG ACTGGTCGCC GACCTACCTG
AAAGAAGTGA AGCATTTCGC ACTGGATAAA TCCTCCTGGG CCTACTTCCT GTATGAATAC
GCGGGTATTC CGGGCACGCT GCTGTGTGGC TGGATGTCGG ATAAAGTCTT CCGCGGCAAC
CGTGGCGCGA CCGGCGTGTT CTTTATGACC CTGGTGACTA TCGCGACCAT CGTTTACTGG
ATGAACCCGG CAGGGAACCC GAACGTTGAT ATGGCTTGTA TGATTATCAT CGGCTTCCTG
ATCTACGGCC CGGTAATGTT GATCGGTCTG CACGCGCTGG AACTGGCGCC GAAAAAAGCG
GCGGGTACGG CGGCGGGCTT TACCGGTCTG TTTGGTTACC TGGGCGGTTC TGTCGCTGCA
AGCGCCATTG TGGGTTATAC CGTTGACTTC TTCGGTTGGG ATGGCGGCTT TATGGTGATG
ATTGGCGGCA GCATTCTGGC GGTAATCCTG CTGGTGGTCG TGATGATTGG TGAAAAACGC
CATCATGATG AGCTGCAGTT AAAACGCAAC GGAGGCTAA
|
|---|
| Protein sequence | MLSIFKPAPH KARLPAAEID PTYRRLRWQI FLGIFFGYAA YYLVRKNFAL AMPYLVEQGF
SRGDLGFALS GISIAYGFSK FIMGSVSDRS NPRVFLPAGL ILAAAVMLFM GFVPWATSSI
AVMFVLLFLC GWFQGMGWPP CGRTMVHWWS QKERGGIVSV WNCAHNVGGG IPPLLFLLGM
AWFNDWKAAL YMPAFGAIVV ALFAFAMMRD TPQSCGLPPI EEYKNDYPDD YNEKAEEELT
AKQIFMQYVL PNKLLWYIAI ANVFVYLLRY GILDWSPTYL KEVKHFALDK SSWAYFLYEY
AGIPGTLLCG WMSDKVFRGN RGATGVFFMT LVTIATIVYW MNPAGNPNVD MACMIIIGFL
IYGPVMLIGL HALELAPKKA AGTAAGFTGL FGYLGGSVAA SAIVGYTVDF FGWDGGFMVM
IGGSILAVIL LVVVMIGEKR HHDELQLKRN GG
|
|---|
| |