Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2460 |
Symbol | |
ID | 6484286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 2381112 |
End bp | 2381996 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642737795 |
Product | putative GntR family regulatory protein |
Protein accession | YP_002041536 |
Protein GI | 194442653 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.0419984 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTACGTA AAAAACAATA CAATTCAAAA GCTAATGTGT CATATCTGAT ATATCAGCAA GCAAACTTAA TGAAATATAC AATAACAACA ATAAAGTATG TAAATTTTCT TATATCTGAT ATATTAGATC CGTTAATTTT GAATAAATTA ACTACAATGG AGCCGGGTTT AACCATGGAG GAGAAGAAAA TGAAAAATAG ATTAAAGCGT GACTTTAGTC ACATATCAAT TGAAATACCC AAATCCATCA CCCAGGTGAT TAAAGAGAAA ATAAGGGAGA TGATTATCCA TGGCGATTTC GATCTTGGGC AAGCGATCAG TGAAAATGAA CTATCAAATA TTCTGATGGT AAGTAAAACA CCAATTCGTG AAGCTTTTAT TTGGCTGAGC TATAATGAAA ACTTAGTCAA CATCATTCCC CGCAGTGGGA CATTTGTTTT TTCTGTCACC GACGAGGATA TCAATGATCT CATCAAAATG AGGGTTATCC TTGAACAGGG CGCAATTCGT GAAGCGATGG AGAAAAATGC TAACAATGTC ATAGTCGAAT TAAGCAATAT TTTATCGAAG TCAGCAAAAA TTAATGCAGA GCGAGATACG CAAGCTTACC TCAAACTGGA TCATGATTTT CATTATGTTT TTGTGAAATA TGCCGATAAT AAATACATTT CACAAGCACA CCTGTTGATC TCAGCACGTT TATTGGCAAT TCGCTACAGA CTGGATTTTA CCGCTGAATA TATCACCAGC TCTAACCGTG GACATGCCAC TATTTTGGAT ATGTTAAAAA ACAACAACGT CGAGGGCGTC TGTAATTTTA TCACGCACCA CATCGGTAGC GGTTTTACAG AACGCGCAAG AAAACTTCTT GCGCTGAAAG CGTAA
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Protein sequence | MLRKKQYNSK ANVSYLIYQQ ANLMKYTITT IKYVNFLISD ILDPLILNKL TTMEPGLTME EKKMKNRLKR DFSHISIEIP KSITQVIKEK IREMIIHGDF DLGQAISENE LSNILMVSKT PIREAFIWLS YNENLVNIIP RSGTFVFSVT DEDINDLIKM RVILEQGAIR EAMEKNANNV IVELSNILSK SAKINAERDT QAYLKLDHDF HYVFVKYADN KYISQAHLLI SARLLAIRYR LDFTAEYITS SNRGHATILD MLKNNNVEGV CNFITHHIGS GFTERARKLL ALKA
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