Gene SNSL254_A2459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2459 
Symbol 
ID6483741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2379737 
End bp2381062 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content42% 
IMG OID642737794 
Productputative permease 
Protein accessionYP_002041535 
Protein GI194444282 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.0482459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGTC CACAAGAAAA TTTATACGAT GCAATTCGTA TTGTAAAAAG GAAAATCATT 
CCTTTGGCCT TTATTCTTTA CTTTTTTAAC TATATGGATC GTGTCAATAT TGGGTTTGCT
GCATTACGCA TGAATGAATC TCTCGGTATT ACGCCTGAGG ATTTCGCTAA TATTTCTTCT
ATATTCTTCA TATCATATTT AATCTTTCAA ATTCCGAGTA GCATTGGCTT GCAAAAGCTT
GGTGCAAGAA AATGGATTAG TTCCATTATT ATCGGCTGGG GAGCGGTAAC AGGGCTGATT
TTTTTTGCTA AAGATACTCA ACATATTTTG CTGGCTCGCA TTTTTTTGGG GGTATTTGAA
GCTGGCTTTT TCCCGGGCAT GGTTTATTAT CTTGCATGCT GGTTCCCGGC TCGTGAACGC
GGAAAAGTCA ATAGTTTCTT CATGTTATCT ATTGCTGTTG CATCGGTATT GGCTGCGCCG
ATGTCTGGTT GGATCATCGA GCATTTGAAT ACCCCGGATT ATGAAGGCTG GCGCTGGCTT
TTTGCTATTG AAGGTATCCC TACCGTATTC CTTGGCATCC TGACATTTTA TTTACTGCCT
GACAGTCCAG AAAAGGCTAA ATGGCTTACG CCACAGCAGA TATCGGCCTT AGTTAATAAA
TTACGTACTG ACAATGAAAC CGCAGCTGCA TTAAATAAAA ATACCAACTC ATCCTTTCTT
TCCGTAATCA AAAATCCAGT TTTGCTTCAG CTTTCTTTCG CCTACATGTT GATTCAGGCG
GCTGCTCTGG CGGCAAACTA CTGGTTGCCG GGGTTGGTGA AGGGATTTTC AGCTGATTTT
ACGGATACTG ACGTTGGTTT AATCATGAGT ATTCCGTTTA TTTTCGCTAT GTTCAGCATG
CCCTGGTGGG GCTGGCATTC CGATAAAAAG AATGAACGAA AATGGCATGC TGCATTACCC
ATGTTTCTGG CAGGCTGTGG TTTTCTGATG ATTGCTCTTG TCCCCTCAAT GTCGCTGAGA
ATGCTGGGGC TAACGTTCTA TGGTGTTGGG ATCCTCAGCT ATTACGGACC TTACTGGGCG
CTGCCTTCTG CATTATTGTC GCCGTCAGGG TTGGCTATCA GCATTGCGTT TATTAACTCA
TGTTCAAGTC TTGGCGGATT CCTGATTAAT AAGTCACTGG GATTTTTTTC TACTCATTAT
GGTGCGACAG GAATATTTAT TGTAGAGGCA ATACTTTGCT TCGCTGCGGT AGCCGTTTTG
GCGTTAATGA AAATTGATGT GAAAAAAGAA AAAAGCCAAC AAACAAATGT TGTATCACGA
ACCTGA
 
Protein sequence
MSSPQENLYD AIRIVKRKII PLAFILYFFN YMDRVNIGFA ALRMNESLGI TPEDFANISS 
IFFISYLIFQ IPSSIGLQKL GARKWISSII IGWGAVTGLI FFAKDTQHIL LARIFLGVFE
AGFFPGMVYY LACWFPARER GKVNSFFMLS IAVASVLAAP MSGWIIEHLN TPDYEGWRWL
FAIEGIPTVF LGILTFYLLP DSPEKAKWLT PQQISALVNK LRTDNETAAA LNKNTNSSFL
SVIKNPVLLQ LSFAYMLIQA AALAANYWLP GLVKGFSADF TDTDVGLIMS IPFIFAMFSM
PWWGWHSDKK NERKWHAALP MFLAGCGFLM IALVPSMSLR MLGLTFYGVG ILSYYGPYWA
LPSALLSPSG LAISIAFINS CSSLGGFLIN KSLGFFSTHY GATGIFIVEA ILCFAAVAVL
ALMKIDVKKE KSQQTNVVSR T