| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2457 |
|---|
| Symbol | gyrA |
|---|
| ID | 6484768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2375474 |
|---|
| End bp | 2378110 |
|---|
| Gene Length | 2637 bp |
|---|
| Protein Length | 878 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642737792 |
|---|
| Product | DNA gyrase subunit A |
|---|
| Protein accession | YP_002041533 |
|---|
| Protein GI | 194445296 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0910619 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 0.208896 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACC TTGCGAGAGA AATTACACCG GTCAACATTG AGGAGGAGCT GAAGAGCTCC
TATCTGGATT ATGCGATGTC GGTCATTGTT GGCCGTGCGC TGCCGGATGT CCGAGATGGC
CTGAAGCCGG TACACCGTCG CGTACTTTAC GCCATGAACG TATTGGGCAA TGACTGGAAC
AAAGCCTATA AAAAATCTGC CCGTGTCGTT GGTGACGTAA TCGGTAAATA CCATCCCCAC
GGCGATTCCG CAGTGTATGA CACCATCGTT CGTATGGCGC AGCCATTCTC GCTGCGTTAC
ATGCTGGTGG ATGGTCAGGG TAACTTCGGT TCTATTGACG GCGACTCCGC GGCGGCAATG
CGTTATACGG AGATCCGTCT GGCGAAAATC GCCCACGAAC TGATGGCCGA TCTCGAAAAA
GAGACGGTGG ATTTCGTGGA TAACTATGAC GGTACGGAAA AAATTCCGGA CGTCATGCCG
ACCAAAATTC CGAATCTGCT GGTGAACGGT TCTTCCGGTA TCGCAGTAGG TATGGCGACG
AATATCCCGC CGCACAACCT GACGGAAGTG ATTAACGGCT GCCTGGCGTA TATCGACAAC
GAAGACATCA GCATTGAAGG GCTGATGGAA CATATTCCGG GGCCGGACTT CCCGACCGCC
GCGATCATCA ACGGTCGTCG TGGTATCGAA GAAGCCTACC GTACCGGTCG TGGCAAAGTG
TACATTCGCG CCCGCGCGGA AGTTGAAGCT GACGCGAAAA CGGGCCGTGA AACCATCATC
GTCCATGAAA TTCCCTATCA GGTGAACAAA GCGCGCCTGA TCGAGAAAAT CGCCGAGCTG
GTGAAAGATA AACGCGTGGA AGGCATCAGC GCGCTGCGTG ACGAATCCGA TAAAGACGGG
ATGCGCATCG TGATTGAAGT GAAACGCGAT GCGGTGGGTG AGGTGGTGCT TAATAATCTC
TACTCCCAGA CCCAGCTACA GGTTTCCTTC GGTATTAACA TGGTGGCGCT GCATCATGGC
CAGCCGAAGA TCATGAACCT GAAAGATATT ATTTCAGCGT TCGTGCGCCA CCGCCGTGAA
GTGGTGACGC GTCGGACTAT TTTTGAACTG CGTAAAGCCC GTGACCGCGC GCATATCCTT
GAAGCTCTGG CGATTGCGCT GGCCAACATC GATCCGATTA TCGAACTGAT TCGCCGTGCG
CCAACGCCGG CGGAAGCGAA AGCGGCGCTG ATTTCGCGTC CGTGGGATCT GGGCAACGTT
GCTGCGATGC TGGAGCGCGC CGGTGACGAC GCCGCGCGTC CGGAATGGCT GGAGCCAGAA
TTTGGCGTGC GTGACGGTCA GTACTACCTG ACTGAACAGC AGGCGCAGGC GATTCTGGAT
CTGCGTTTGC AGAAACTGAC CGGCCTGGAG CATGAAAAAC TGCTCGACGA ATACAAAGAG
TTGCTGGAGC AGATTGCTGA ACTGCTGCAC ATTCTGGGCA GCGCCGATCG CCTGATGGAA
GTGATCCGCG AAGAGATGGA GTTAATTCGC GATCAGTTCG GCGATGAGCG TCGTACCGAA
ATCACCGCCA ACAGCGCCGA TATTAATATC GAAGATCTGA TTAGCCAGGA AGATGTTGTC
GTAACCTTGT CTCATCAGGG CTATGTGAAA TATCAGCCGT TAACCGATTA CGAAGCACAG
CGTCGTGGCG GTAAAGGCAA ATCTGCCGCG CGTATTAAAG AAGAAGACTT TATCGACCGT
CTGCTGGTGG CCAACACCCA TGACACCATC CTCTGCTTCT CCAGCCGGGG CCGTCTGTAC
TGGATGAAGG TCTATCAGTT GCCGGAAGCC AGCCGTGGCG CGCGCGGTCG TCCGATCGTT
AACCTGCTGC CGCTGGAAGC CAACGAACGT ATCACCGCGA TTCTGCCGGT TCGTGAATAC
GAAGAAGGCG TCAACGTCTT TATGGCGACC GCCAGCGGTA CCGTGAAGAA AACGGCGCTG
ACCGAATTCA GCCGTCCGCG TTCCGCCGGT ATTATCGCGG TGAACCTCAA CGACGGCGAC
GAGCTGATTG GCGTTGACCT GACTTCTGGT TCTGACGAAG TCATGCTGTT CTCGGCCGCG
GGTAAAGTGG TGCGCTTCAA AGAAGACGCC GTCCGTGCGA TGGGGCGTAC CGCGACCGGT
GTGCGCGGTA TTAAGCTGGC GGGAGACGAT AAAGTCGTCT CTCTGATCAT CCCACGCGGC
GAAGGCGCTA TTCTGACCGT AACGCAAAAC GGCTACGGGA AGCGTACCGC AGCGGACGAG
TACCCGACCA AGTCTCGTGC GACGCAGGGC GTTATCTCTA TCAAAGTGAC CGAGCGCAAC
GGTTCCGTTG TCGGTGCGGT ACAGGTAGAC GATTGCGACC AGATCATGAT GATCACGGAT
GCCGGTACTC TGGTGCGTAC CCGAGTGTCT GAGATCAGCG TAGTGGGACG TAATACCCAG
GGCGTTATCC TTATCCGCAC GGCGGAAGAC GAAAACGTGG TGGGTCTGCA ACGCGTTGCT
GAACCGGTAG ATGACGAAGA ACTCGACGCT ATCGACGGCA GCGTGGCGGA AGGGGATGAG
GATATCGCCC CGGAAGCGGA AAGCGATGAC GACGTTGCGG ATGACGCTGA CGAGTAA
|
|---|
| Protein sequence | MSDLAREITP VNIEEELKSS YLDYAMSVIV GRALPDVRDG LKPVHRRVLY AMNVLGNDWN
KAYKKSARVV GDVIGKYHPH GDSAVYDTIV RMAQPFSLRY MLVDGQGNFG SIDGDSAAAM
RYTEIRLAKI AHELMADLEK ETVDFVDNYD GTEKIPDVMP TKIPNLLVNG SSGIAVGMAT
NIPPHNLTEV INGCLAYIDN EDISIEGLME HIPGPDFPTA AIINGRRGIE EAYRTGRGKV
YIRARAEVEA DAKTGRETII VHEIPYQVNK ARLIEKIAEL VKDKRVEGIS ALRDESDKDG
MRIVIEVKRD AVGEVVLNNL YSQTQLQVSF GINMVALHHG QPKIMNLKDI ISAFVRHRRE
VVTRRTIFEL RKARDRAHIL EALAIALANI DPIIELIRRA PTPAEAKAAL ISRPWDLGNV
AAMLERAGDD AARPEWLEPE FGVRDGQYYL TEQQAQAILD LRLQKLTGLE HEKLLDEYKE
LLEQIAELLH ILGSADRLME VIREEMELIR DQFGDERRTE ITANSADINI EDLISQEDVV
VTLSHQGYVK YQPLTDYEAQ RRGGKGKSAA RIKEEDFIDR LLVANTHDTI LCFSSRGRLY
WMKVYQLPEA SRGARGRPIV NLLPLEANER ITAILPVREY EEGVNVFMAT ASGTVKKTAL
TEFSRPRSAG IIAVNLNDGD ELIGVDLTSG SDEVMLFSAA GKVVRFKEDA VRAMGRTATG
VRGIKLAGDD KVVSLIIPRG EGAILTVTQN GYGKRTAADE YPTKSRATQG VISIKVTERN
GSVVGAVQVD DCDQIMMITD AGTLVRTRVS EISVVGRNTQ GVILIRTAED ENVVGLQRVA
EPVDDEELDA IDGSVAEGDE DIAPEAESDD DVADDADE
|
|---|
| |