| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2436 |
|---|
| Symbol | |
|---|
| ID | 6483231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2353372 |
|---|
| End bp | 2354118 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642737774 |
|---|
| Product | ABC superfamily |
|---|
| Protein accession | YP_002041515 |
|---|
| Protein GI | 194443829 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.236791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 0.749794 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACTA TGTGGAAAAC CCTTCATCAG CTGGCGGCGC CGCCCCGGCT GTATCAGATT
TGCGGCAGGC TCGTGCCGTG GCTGGCGGCA GCCGGCATCA TCGCGCTGGC CACCGGCTGG
GTCCGGGGCT TTGGTTTCGC CCCGGCGGAC TACCAGCAGG GGGAGAGCTA CCGCATTATG
TACCTGCATG TCCCGGCGGC CATCTGGTCG ATGGGTATCT ATGCGGCGAT GGCGGTGGCG
GCGTTCACCG GGCTGGTCTG GCAGATGAAA ATGGCCAGCC TTGCCGTCGC GGCGATGGCG
CCGGTGGGGG CGGTGTACAC CTTCATCGCA CTGGTCACCG GCGCGGCGTG GGGCAAACCG
ATGTGGGGCA CCTGGTGGGT GTGGGACGCG CGCCTGACCT CGGAGCTGGT GCTGCTGTTT
CTCTACGCCG GGGTCATCGC CCTGTGGCAC GCCTTTGACG ACCGTAAAAT GGCCGGGCGC
GCGGCGGGCA TTCTGGTGCT GGTCGGCGTG GTGAACCTGC CGGTTATCCA CTATTCCGTC
GAGTGGTGGA ACACCCTGCA CCAGGGCTCG ACGCGGATGC AGCAGAGTAT CGACCCGGCG
ATGCGCTCGC CGCTGCGCTG GGCCATCGCC GGCTTCCTGC TGCTCTTTAT GACGCTTTCG
CTGATGCGGA TGCGCAACCT GATTTTACTG ATGGAAAAAC GCCGCCCGTG GGTGAGCGAA
CTGATACTGA AAAGGGGGCA CCGGTGA
|
|---|
| Protein sequence | MTTMWKTLHQ LAAPPRLYQI CGRLVPWLAA AGIIALATGW VRGFGFAPAD YQQGESYRIM
YLHVPAAIWS MGIYAAMAVA AFTGLVWQMK MASLAVAAMA PVGAVYTFIA LVTGAAWGKP
MWGTWWVWDA RLTSELVLLF LYAGVIALWH AFDDRKMAGR AAGILVLVGV VNLPVIHYSV
EWWNTLHQGS TRMQQSIDPA MRSPLRWAIA GFLLLFMTLS LMRMRNLILL MEKRRPWVSE
LILKRGHR
|
|---|
| |