Gene SNSL254_A2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2428 
Symbol 
ID6484043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp2346768 
End bp2346989 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content40% 
IMG OID642737766 
Productputative homolog of virulence protein MsgA 
Protein accessionYP_002041507 
Protein GI194446140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.851984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.370396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAACCA GCCTGTCAGG GCTGGTTTTT TTTATGCCTA CAATTAAAAA GTTAGCTGAT 
GCCAGAGACG TTATTTTGCA TGAACTGATC GGACATCTTT CCTGTGCAGT GGTCAACGTA 
AAGTCAATGC AGGCAAATAA CGTAAACCAT GTTTGTACTA AAACAGAAAA AGCGCATCTA 
CACCCTATAC TGGAAAAAAT GTTTGCAGTG GCAGGTAAAT GA
 
Protein sequence
MKTSLSGLVF FMPTIKKLAD ARDVILHELI GHLSCAVVNV KSMQANNVNH VCTKTEKAHL 
HPILEKMFAV AGK