Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2417 |
Symbol | |
ID | 6486421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 2335770 |
End bp | 2337530 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642737756 |
Product | putative helicase |
Protein accession | YP_002041498 |
Protein GI | 194442899 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.011156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 0.197081 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTTA CACTCCGCCC CTACCAGCAA GAAGCCGTAG ACGCCACGCT CAGCCACTTT CGCCGCCACC GTACGCCCGC CGTGATTGTT CTGCCGACCG GCGCAGGTAA AAGCCTGGTG ATCGCCGAAC TGGCGCGCGT CGCCCGCGGA CGGGTACTGG TGCTGGCGCA TGTGAAAGAG CTGGTCGCGC AGAACCACGC CAAATATTGC GCGCTGGGGC TGGAAGCGGA TATTTTCGCC GCCGGACTCA AACGTAAAGA GAGTCAGGGC AAAGTCGTGT TCGGCAGCGT ACAGTCGGTG GCGCGTAATC TTGACGCCTT CCAGGAGGAG TTTTCGCTGT TGATTGTCGA TGAATGCCAC CGCATCGGTG ACGATGAAGA CAGTCAGTAT CAGCAAATCC TCACTCACCT GAGTAAAGTT AATCCTCACT TACGTCTGCT TGGGCTCACC GCCACGCCCT TCCGCCTCGG AAAAGGCTGG ATTTATCAAT TTCATTACCA CGGTATGGTG CGCGGCAACG ACAACGCGCT GTTTCGCGAC TGTATTTATG AACTGCCGCT GCGCTATATG ATTAAACACG GCTATCTGAC GCCGCCTGAG CGGCTTGATA TGCCAGTGGT CCAATACGAT TTCAGTCGCC TGCAGGCCCA AAGCAATGGG CTGTTCAGCG AAGCCGACCT GAACCGCGAG CTGAAAAAGC AGCAGCGGAT TACGCCGCAC ATCATCAGCC AGATTATGGA ATTTGCGCAA ACGCGCAAAG GCGTGATGAT TTTCGCCGCC ACGGTCGAAC ATGCGAAAGA GATTGTCGGT CTGCTTCCGG CGGACGACGC GGCGCTGATT ACCGGCGATA CGCCAGGGCC CGAGCGCGAC GCGCTGATTG ATAATTTCAA GGCGCAGCGT TTTCGCTATC TGGTTAACGT CTCGGTGCTG ACCACCGGCT TTGACGCCCC ACACGTTGAT CTCATCGCGA TTCTACGTCC CACGGAGTCA GTTAGTCTTT ACCAACAAAT TGTCGGGCGT GGTCTGCGCC TTGCGCCGGG AAAGACCGAT TGCCTGATTC TTGATTACGC AGGCAACCCG CACGACCTGT ATGCCCCGGA GGTCGGTAGC CCGAAGGGAA AAAGCGATAA CGTCCCTGTC CAGGTATTTT GCCCGGCCTG CGGCTTTGCC AACACCTTCT GGGGGAAAAC CACTGCCGAC GGCACGCTGA TTGAACACTT TGGCCGTCGC TGCCAGGGCT GGTTTGAGGA TGACGACGGC CATCGCGAGC AGTGCGATTT TCGCTTTCGC TTCAAAAACT GCCCGCAGTG TAATGCCGAA AACGATATTG CCGCCCGACG CTGCCGGGAA TGTGACGCTA TTCTGGTCGA CCCGGACGAT ATGTTAAAAG CGGCGCTCAG GCTCAAGGAT GCGTTAGTCC TGCGCTGTAG CGGAATGACG ATGCAGCATG GGCAGGATGA GAAAGGCGAA TGGCTGAAAA TCACTTACTA TGACGAGGAC GGCGCGGATG TCAGTGAGCG CTTCCGCTTG CACACGCCCG CCCAGCGTAC CGCTTTCGAA CAGCTATTTA TTCGCCCGCA TACCCGCACG CCCGGCGTTC CTTTACGCTG GATCACGGCG GCGGATATTG TCGCGCAGCA GGCGCTGTTG CGGCATCCCG ATTTTGTGGT CGCGCGGATG AAAGGCCAGT ACTGGCAGGT GCGTGAAAAA GTGTTCGACT ATGAAGGCCG CTTCCGCCGA GCGCACGAAT TACGTGGTTA A
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Protein sequence | MIFTLRPYQQ EAVDATLSHF RRHRTPAVIV LPTGAGKSLV IAELARVARG RVLVLAHVKE LVAQNHAKYC ALGLEADIFA AGLKRKESQG KVVFGSVQSV ARNLDAFQEE FSLLIVDECH RIGDDEDSQY QQILTHLSKV NPHLRLLGLT ATPFRLGKGW IYQFHYHGMV RGNDNALFRD CIYELPLRYM IKHGYLTPPE RLDMPVVQYD FSRLQAQSNG LFSEADLNRE LKKQQRITPH IISQIMEFAQ TRKGVMIFAA TVEHAKEIVG LLPADDAALI TGDTPGPERD ALIDNFKAQR FRYLVNVSVL TTGFDAPHVD LIAILRPTES VSLYQQIVGR GLRLAPGKTD CLILDYAGNP HDLYAPEVGS PKGKSDNVPV QVFCPACGFA NTFWGKTTAD GTLIEHFGRR CQGWFEDDDG HREQCDFRFR FKNCPQCNAE NDIAARRCRE CDAILVDPDD MLKAALRLKD ALVLRCSGMT MQHGQDEKGE WLKITYYDED GADVSERFRL HTPAQRTAFE QLFIRPHTRT PGVPLRWITA ADIVAQQALL RHPDFVVARM KGQYWQVREK VFDYEGRFRR AHELRG
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