Gene SNSL254_A2415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2415 
Symbolbcr 
ID6485060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2333705 
End bp2334895 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content54% 
IMG OID642737754 
Productbicyclomycin/multidrug efflux system 
Protein accessionYP_002041496 
Protein GI194446697 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0436595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.152549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCC GGCAGCACTC TTCCTTTGCC ATTGTCTTTA TTCTTGGCCT GTTGGCCATG 
TTAATGCCGC TGTCGATTGA TATGTATCTT CCAGCGCTGC CGGTGATTTC TGCGCAATTC
GGCGTGCCTG CCGGTAGCGC GCAGATGACG CTCAGCACCT ATATTCTGGG GTTTGCGCTG
GGTCAGCTTA TCTATGGACC GATGGCGGAT AGCCTCGGGC GTAAGCCGGT CATCCTGGGC
GGGACGCTGG TATTTGCCGC TGCGGCGGTC GCCTGTGCGT TGGCGCAGAC TATCGATCAA
CTGATCGTGA TGCGTTTCTT TCACGGTTTG GCGGCTGCGG CGGCAAGCGT CGTCATCAAT
GCGCTGATGC GGGATATTTA TCCAAAGGAA GAGTTTTCGC GCATGATGTC ATTTGTCATG
CTGGTCACTA CGATAGCGCC GTTAATGGCG CCCATTGTTG GCGGCTGGGT GTTGGTATGG
TTAAGCTGGC ACTATATCTT CTGGATACTG GCCATTGCGG CGATTCTGGC GTCAGTCATG
ATCTTTGCTC TGATTAAAGA GACGCTGCCC GTTGAGCGGC GTCAGCCTTT TCATATTCGT
ACCACAATAG GTAACTTTGC CGCGTTGTTT CGCCACAAAC GCGTACTGAG CTATATGCTG
GCGAGCGGGT TCAGTTTTGC CGGTATGTTC TCTTTTTTGA GCGCGGGGCC GTTTGTCTAT
ATCGAAATTA ATCATGTTCC GCCGCAGGAT TTCGGCTACT ACTTCGCGTT GAACATCGTA
TTTCTGTTTG TGATGACGAT TATCAACAGC CGTTTTGTCA GACGGGTAGG GGCGCTAAAC
ATGTTTCGGG CCGGGCTATG GATTCAGTTT GCGATGGCGG TATGGATGGT TTTCAGCGCG
CTGATGGGCA TTGGATTCTG GGCGCTGGTG GTCGGCGTTG CGGCGTTTGT CGGCTGTGTG
TCGATGGTTT CGTCCAATGC GATGGCGGTC ATTTTGGATG AGTTTCCGCA TATGGCCGGA
ACGGCGTCTT CGTTGGCGGG CACTTTCCGC TTTGGTATTG GCGCTATCGT CGGCGCGTTG
CTGTCGCTGG CTACCTTTAC CAGTGCGTGG CCGATGATCT GGTCGATTGC GCTTTGCGCC
GCCTGTTCCA TTCTGTTTTA TCTCTACGCC AGCCGTCCCA AAAAACGGTG A
 
Protein sequence
MTTRQHSSFA IVFILGLLAM LMPLSIDMYL PALPVISAQF GVPAGSAQMT LSTYILGFAL 
GQLIYGPMAD SLGRKPVILG GTLVFAAAAV ACALAQTIDQ LIVMRFFHGL AAAAASVVIN
ALMRDIYPKE EFSRMMSFVM LVTTIAPLMA PIVGGWVLVW LSWHYIFWIL AIAAILASVM
IFALIKETLP VERRQPFHIR TTIGNFAALF RHKRVLSYML ASGFSFAGMF SFLSAGPFVY
IEINHVPPQD FGYYFALNIV FLFVMTIINS RFVRRVGALN MFRAGLWIQF AMAVWMVFSA
LMGIGFWALV VGVAAFVGCV SMVSSNAMAV ILDEFPHMAG TASSLAGTFR FGIGAIVGAL
LSLATFTSAW PMIWSIALCA ACSILFYLYA SRPKKR