Gene SNSL254_A2411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2411 
Symbol 
ID6482498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2329256 
End bp2330350 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content52% 
IMG OID642737750 
Productinner membrane ABC transporter permease protein YejB 
Protein accessionYP_002041492 
Protein GI194444432 
COG category[R] General function prediction only 
COG ID[COG4174] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.026734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCCT ATCTTATCCG CCGTCTGTTA CTGGTGATCC CCACGCTATG GGCCATTATT 
ACCATTAACT TTTTTATCGT GCAGATCGCT CCCGGCGGCC CTGTCGATCA GGCTATTGCC
GCGATTGAAT TTGGCCAGGG CGGCGCGTTG CCCGGCGCCA GCGGCGAAGG CGTTCGCGCC
AGTCATGCGC AAACCGGCGT CGGCAATATC AGCGACAGCC ATTATCGCGG CGGCCGGGGA
CTCGATCCGG AGGTGATCGC GGAGATCACC CATCGCTACG GTTTCGACAA ACCACTGCAT
GAGCGTTATT TCAAGATGCT ACGGGACTAT CTCTCTTTTG ACTTCGGCGA CAGTCTGTTT
CGCAGCGCAT CCGTACTAAC GCTGATCAAA GATAGCCTTC CCGTCTCCAT TACCCTGGGA
TTATGGAGCA CGCTGATTAT TTATCTGGTG TCTATCCCGC TGGGGATTCG CAAAGCCGTC
CATAACGGCA GTCGCTTTGA TGTGTGGAGC AGCGCGTTTA TCATTATTGG TTATGCGATC
CCCGCCTTTC TGTTCGCTAT TTTATTAATC GTCTTTTTTG CCGGCGGCAG CTACTACGAT
ATCTTTCCGC TACGTGGCCT GGTCTCCGCC AACTTTGACA CGTTACCGTG GTACCAGAAA
ATCACCGATT ATTTGTGGCA TATTACGCTG CCGGTGTTGG CGACCGTCAT CGGCGGTTTT
GCCGCCCTGA CGATGCTGAC GAAAAATTCG TTTCTCGACG AGGTGCGTAA ACAGTATGTC
GTTACCGCTC GCGCTAAAGG CGTGAGTGAA AAAAACATTC TCTGGAAACA TGTTTTTCGT
AACGCCATGC TGCTGGTGAT CGCCGGGTTT CCCGCCACTT TTATCAGTAT GTTTTTCACC
GGCTCGCTGC TAATTGAAGT CATGTTCTCG CTCAACGGCC TGGGGCTGCT GGGTTATGAA
GCAACCGTTT CGCGCGACTA TCCGGTGATG TTCGGCACGC TTTATATCTT TACCCTGATT
GGCTTATTAC TGAATATCCT GAGCGATATC AGCTATACGC TGGTCGATCC ACGCATTGAT
TTTGAGGGAC GATAA
 
Protein sequence
MGAYLIRRLL LVIPTLWAII TINFFIVQIA PGGPVDQAIA AIEFGQGGAL PGASGEGVRA 
SHAQTGVGNI SDSHYRGGRG LDPEVIAEIT HRYGFDKPLH ERYFKMLRDY LSFDFGDSLF
RSASVLTLIK DSLPVSITLG LWSTLIIYLV SIPLGIRKAV HNGSRFDVWS SAFIIIGYAI
PAFLFAILLI VFFAGGSYYD IFPLRGLVSA NFDTLPWYQK ITDYLWHITL PVLATVIGGF
AALTMLTKNS FLDEVRKQYV VTARAKGVSE KNILWKHVFR NAMLLVIAGF PATFISMFFT
GSLLIEVMFS LNGLGLLGYE ATVSRDYPVM FGTLYIFTLI GLLLNILSDI SYTLVDPRID
FEGR