Gene SNSL254_A2405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2405 
Symbol 
ID6485843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2321948 
End bp2322520 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content51% 
IMG OID642737744 
Productelongation factor P 
Protein accessionYP_002041486 
Protein GI194443868 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P
[TIGR02178] elongation factor P-like protein YeiP 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0000243209 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAAGAG CGAACGAAAT CAAAAAAGGT ATGGTACTGA ACTACAACGG CAAATTGCTG 
ATTGTGAAAG ATATCGACAT TCAGTCACCT ACCGCCCGTG GCGCCGCCAC ACTGTATAAA
ATGCGTTTTT CCGATGTCCG CACCGGTCTG AAAGTGGAAG AACGTTTCAA AGGCGACGAT
ATCGTTGATA CCGTCACCCT GAGCCGTCGC GGCGTTGACT TTTCTTATGT CGATGGCAAC
GAATATGTGT TCATGGATAA AGAAGACTAT ACGCCGTATA CCTTCACCAA AGATCAGATT
GAAGAAGAGT TGCTGTTTAT GCCTGAAGGC GGAATGCCGG ATATGCAGGT TCTGACCTGG
GACGGCCAAC TGCTGGCGCT AGAGCTTCCG CAGACCGTGG ATCTGGAAAT CGTCGAAACC
GCGCCGGGTA TTAAAGGAGC GTCCGCCAGC GCACGTAACA AACCCGCGAC ATTAAGCACC
GGTCTGGTGA TTCAGGTTCC CGAATACCTG AGCGCAGGTG AGAAAATCCG CATTCATATC
GAAGAGCGCC GTTATATGGG GCGCGCGGAT TAA
 
Protein sequence
MPRANEIKKG MVLNYNGKLL IVKDIDIQSP TARGAATLYK MRFSDVRTGL KVEERFKGDD 
IVDTVTLSRR GVDFSYVDGN EYVFMDKEDY TPYTFTKDQI EEELLFMPEG GMPDMQVLTW
DGQLLALELP QTVDLEIVET APGIKGASAS ARNKPATLST GLVIQVPEYL SAGEKIRIHI
EERRYMGRAD