Gene SNSL254_A2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2393 
Symbol 
ID6485485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2312755 
End bp2313804 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content54% 
IMG OID642737733 
Productinner membrane protein YeiH 
Protein accessionYP_002041475 
Protein GI194442801 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0110407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.000836246 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAGAAC TCACCTTGCA GAATCATCGT CGTACAATGT GGCATTTTAT ACCGGGGCTC 
GCTCTGAGCG CCGTCATTAC AGGAGTCGCC CTGTGGGGCG GCGCTATCCC TGCCGTTGCA
GGCGCGGGGT TCAGCGCCCT GACCCTGGCT ATCCTGCTGG GTATGGTTAT CGGGAATACC
ATCTATCCAC AAATATGGAA ACAATGCGAC GGCGGCGTGC TGTTTGCAAA ACAACATTTA
CTGCGTTTAG GGATTATCCT TTACGGCTTC CGCCTTACCT TTTCACAAAT CGCCGATGTG
GGCATTAGCG GTATTGTGAT TGACGTATTA ACGCTTTCCA GCACGTTCAT GCTGGCCTGC
TTCTTAGGCC AAAAAGTCTT TGGTCTGGAC AGGCATACCA GCTGGCTGAT TGGCGCCGGT
AGCAGTATCT GCGGCGCGGC GGCGGTACTG GCGACAGAAC CGGTGGTAAA AGCGGAAGCC
AGTAAGGTTA CTGTAGCCGT CGCGACTGTC GTTATTTTCG GCACCATCGC TATTTTCCTT
TACCCGGCAA TGTATCCGCT GCTGGCGCAC TGGTTCAGCC CGGAAACTTA CGGCATCTAT
ATCGGCTCAA CCATGCATGA AGTCGCGCAA GTGGTCGCAG CGGGTCATGC CGTTAGCCCG
GATGCGGAAA ATGCGGCAGT TATCGCTAAG ATGCTGCGTG TCATGATGCT GGCGCCGTTC
CTGATCATTC TGGCGGCGCG CGTTAAACAG CTTTCACCGG CGACCGGCGC GGAAAAAAGC
AAAATTACCA TTCCGTGGTT TGCTATTTTC TTCATCGTAG TGGCGATCTT CAACTCTTTC
CACCTGCTGC CGAAAGCCGT GGTGGATATG CTGGTGACGC TGGACACAGT GCTGCTGGCG
ATGGCAATGG CGGCGTTGGG TCTGACCACT CACGTTAGCG CATTGAAAAA AGCGGGGGCG
AAACCGCTGC TGATGGCGCT GGCATTATTC GCCTGGCTGA TTATTGGCGG TGGCGCCATT
AACGTCCTAA TCCATAGCCT TATCGCATAA
 
Protein sequence
MTELTLQNHR RTMWHFIPGL ALSAVITGVA LWGGAIPAVA GAGFSALTLA ILLGMVIGNT 
IYPQIWKQCD GGVLFAKQHL LRLGIILYGF RLTFSQIADV GISGIVIDVL TLSSTFMLAC
FLGQKVFGLD RHTSWLIGAG SSICGAAAVL ATEPVVKAEA SKVTVAVATV VIFGTIAIFL
YPAMYPLLAH WFSPETYGIY IGSTMHEVAQ VVAAGHAVSP DAENAAVIAK MLRVMMLAPF
LIILAARVKQ LSPATGAEKS KITIPWFAIF FIVVAIFNSF HLLPKAVVDM LVTLDTVLLA
MAMAALGLTT HVSALKKAGA KPLLMALALF AWLIIGGGAI NVLIHSLIA