Gene SNSL254_A2383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2383 
Symbol 
ID6485452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp2300511 
End bp2301653 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content55% 
IMG OID642737722 
Producthypothetical protein 
Protein accessionYP_002041464 
Protein GI194445054 
COG category[S] Function unknown 
COG ID[COG2311] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.76362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTA ATGTCACGCT GGATTTTGTA CGTGGCGTCG CTATCCTCGG TATCCTGCTT 
CTTAACATTA GCGCCTTTGG ATTGCCGAAG GCGGCTTATC TCAATCCCGC CTGGTACGGC 
GCGATCGTTC CCGAAGACGC CTGGTCCTGG GCGATTCTCG ATATTGTGGC GCAGGCTAAG 
TTTCTTACTC TGTTCGCGTT GTTGTTTGGC GCGGGGCTAC AAATGCTGCT TCCGCGTGGT 
AAACAGTGGA TTCAGTCGCG CTTAACGCTA TTGGTACTGT TAGGTTTTAT CCATGCGTTA 
TTCTTTTGGG ACGGCGACAT TCTGCTGGCC TACGGTCTGG TCGGGTTAAT TTGCTGGCGA 
CTGGTACGCG ACGCGCCTTC GGTAAAAAGC CTGTTCAATA CTGGCATACT CCTTTATCTG 
GTCGGGATTG GCGTGCTACT GCTGCTGGGC GTGGTATCGA GTAGCGAAAC CAGCCGCGCC 
TGGACGCCGG ATGCGTCGGC AATATTGTAT GAAAAATACT GGAAGCTGAA TGGCGGCATG 
GAGGCTATCA GCAACCGGGC AGAGATGCTG TCGAATAGTT TACTGGCGCT CGGCGCGCAG 
TATGGCTGGC AACTGGCGGG TATGATGCTG CTGGGCGCTG CGCTAATGCG TAGCGGCTGG 
CTGAAAGGTC AGTACAGTCT GCGGCACTAT CGCCGTACCG GGGCTCTGCT GGTGGCGTTA 
GGGCTAATGA TCAACCTGCC TGCGGTCATC TTACAATGGC GGCTGGACTG GGCGTACCGC 
TGGTGCGCCT TCTTATTGCA GGCGCCGCGC GAACTGAGCG CGCCGTTGCA AACGCTGGGC 
TATGCCGCGC TGATGTTTGG CTTCTGGCCG CAGCTTAGCC GATGCAGACT GACGCTTGCC 
ATTGCCTGCG TAGGGCGAAT GGCGCTGACC AATTATCTGC TGCAGACGAT CATCTGTACC 
ACGCTGTTTT ATCAGTTTGG CTTATTTATG AAATTCAATC GACTGGAACT CTTGTTCTTT 
GTCGTTCCGG TATGGGCAAT AAACCTTCTC TTTTCCGTCA TCTGGCTACG TTTCTGGCGA 
CAGGGACCGG TCGAGTGGTT ATGGCGTCAA CTTACGTTGC GCGCGTCAGG ATCGCTCAGA 
TAA
 
Protein sequence
MERNVTLDFV RGVAILGILL LNISAFGLPK AAYLNPAWYG AIVPEDAWSW AILDIVAQAK 
FLTLFALLFG AGLQMLLPRG KQWIQSRLTL LVLLGFIHAL FFWDGDILLA YGLVGLICWR 
LVRDAPSVKS LFNTGILLYL VGIGVLLLLG VVSSSETSRA WTPDASAILY EKYWKLNGGM 
EAISNRAEML SNSLLALGAQ YGWQLAGMML LGAALMRSGW LKGQYSLRHY RRTGALLVAL 
GLMINLPAVI LQWRLDWAYR WCAFLLQAPR ELSAPLQTLG YAALMFGFWP QLSRCRLTLA 
IACVGRMALT NYLLQTIICT TLFYQFGLFM KFNRLELLFF VVPVWAINLL FSVIWLRFWR 
QGPVEWLWRQ LTLRASGSLR