Gene SNSL254_A2382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2382 
SymbolgalS 
ID6483762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2299339 
End bp2300361 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content56% 
IMG OID642737721 
ProductDNA-binding transcriptional regulator GalS 
Protein accessionYP_002041463 
Protein GI194445410 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.824252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCA TTCGTGATGT AGCGCGCCAG GCTGGCGTGT CTGTAGCGAC CGTTTCCCGC 
GTACTGAATA ACAGCGCGTT GGTCAGTCCC GACACCCGTG ACGCCGTTAT GCAGGCCGTC
ACCCTGCTGG GATATCGGCC AAATGCGAAT GCGCAAGCGC TGGCCACCCA GGTGAGCGAC
ACCATCGGCG TCGTGGTCAT GGATGTTTCC GATGCCTTTT TCGGCGCTCT GGTGAAAGCC
GTAGATCTGG TCGCGCAGCA GCACCAGAAA TATGTTCTCA TTGGCAACAG TTATCATGAG
GCGGAAAAAG AGCGCCATGC GATTGAAGTC TTGATCCGTC AGCGTTGTAA CGCATTGATT
GTTCACTCAA AAGCCTTAAC CGATCGCGAG CTGAGCGACT TTATGGATCA GATCCCTGGT
ATGGTGCTGA TTAACCGTAT CGTGCCGGGT TATGCGCATC GTTGTGTCTG TCTCGACAAT
GTGAGCGGCG CCAGAATGGC GACCCGAATG TTGCTGAATA ATGGACATCA ACGCATCGGC
TACCTGGCCT CCAGCCACCG TATTGAAGAT GACGCGATGC GCAGAGAAGG GTGGTTACAC
GCGCTGCAAG AGCAGGGGGT TGCTGCGTCG GAGAGCTGGA TTGGCACCGG CACGCCGGAT
ATGCAGGGCG GCGAGTCGGC AATGGTTGAG TTGCTGGGAC GCAATCTGCA ACTGACGGCG
GTATTTGCCT ATAACGATAA CATGGCGGCG GGCGCGCTGA CGGCGTTAAA AGATAACGGC
ATCGCCATTC CCTTGCATCT GTCTGTCATC GGTTTCGATG ATATCCCTAT TGCTCGTTAT
ACCGATCCTC AGTTGACTAC CGTGCGCTAT CCTATTGCTT CTATGGCGAA AATCGCGACC
GAGCTGGCGT TACAGGGGGC CGCAGGCACG CTGGATATCA CGGCGACGCA CTGCTTCATG
CCGACGCTGG TACGGCGCCA TTCGGTGGCG TGGCGACAGA ATGCGGTACT GATCACTAAC
TGA
 
Protein sequence
MITIRDVARQ AGVSVATVSR VLNNSALVSP DTRDAVMQAV TLLGYRPNAN AQALATQVSD 
TIGVVVMDVS DAFFGALVKA VDLVAQQHQK YVLIGNSYHE AEKERHAIEV LIRQRCNALI
VHSKALTDRE LSDFMDQIPG MVLINRIVPG YAHRCVCLDN VSGARMATRM LLNNGHQRIG
YLASSHRIED DAMRREGWLH ALQEQGVAAS ESWIGTGTPD MQGGESAMVE LLGRNLQLTA
VFAYNDNMAA GALTALKDNG IAIPLHLSVI GFDDIPIARY TDPQLTTVRY PIASMAKIAT
ELALQGAAGT LDITATHCFM PTLVRRHSVA WRQNAVLITN