Gene SNSL254_A2376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2376 
Symbol 
ID6482762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2292617 
End bp2293858 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content50% 
IMG OID642737715 
Productputative oxidoreductase 
Protein accessionYP_002041457 
Protein GI194442791 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAC AAAATTATCT GGATGAACTC ACGCCTGGTT TTACGCCATT ACTGGCAATA 
AAAGAGGCTT CACGTTGTTT ATTATGTCAC GATGCGCCCT GTAGTCAGGA TTGCCCGGCG
CAAACCGATC CGGGGAAATT TATTCGTTCT ATTTACTTTC GCAATTTTAA AGGCGCAGCG
GAAACTATCC GGGAAAATAA TGCGCTTGGC GCCGTCTGCG CCAGAGTCTG TCCGACGGAA
AAATTATGCC AGCGCGGATG TACACGTTCC GGAATAGATA AACCTATTGA TATTGCACGC
CTGCAACGTT TTATTACCGA TTTTGAACAG CAGACTGCCA TGCAGATTTA TCAGCCCGGG
AGTAAAACAC GCGGGAAAGT CGCGATTATT GGCGCGGGTC CGGCAGGTTT GCAGGCAAGC
GTGACGCTCA CGCATTTAGG CTATGACGTC ACCATTTACG AAAAACAGCC GCAGCCCGGC
GGATGGCTGC GTCACGGCAT CCCGGCATTT CGTCTGCCGC AAAGCGTACT CGATCAGGAA
ATTGCCCGCA TTGTAGAAAT GGGCGTCAAT ATTAAATGTA ATTGTGACGT GGGCGGGTCG
CTATCGCTTG CGCAACTCAA AGCCGAATAT CGCGCCGTGC TGATGACCGT CGGGATGTCC
TGTGGCTCTG ATTTACCGTT ATTTGAGCAA GCCAGTCACG TAGAGATTGC CGTTGATTTT
TTACAGCGCG CCCGTCAGGC CGACGGCGAT ATTAGCGTTC CGCGTAGTGC ATTAATTATT
GGCGGCGGCG ACGTAGCGAT GGATGTCGCC AGTACGTTAA AAATTCTCGG CTGCCCTTCC
GTCACCTGCG TGGCGCGGGA AGAATTAGCC CAATTTCCCG CCAGCGAAAA AGAATTTACC
AGCACGCAGG CATTAGGCGT ATCGATTATT GATGGTTTTA CGCCTGTCGC CGTCAGCGGA
AATAAAGTGA TCTTCCACCA TGTACGCCAC TCAGGAGAAC TGACGCTGAA AGCGGAAAAT
ATTATTTTGG CCGTGGGGCA GCACGCGCGA CTGGATACCT TTGCGGAGAT AAAAGCGCAG
CATAATATTA TCGACACGCA TAATTATCAA ACCGACGACC CGGCGATCTT TGCCGCTGGC
GATATTGTTA AAGGTGATAA GACCGTCGTT TATGCGGTAA AAACCGGAAA AGAAGCCGCT
CAGGCTATTC ATCATTATTT AGAGGAGACC TGCTCATGTT AA
 
Protein sequence
MPQQNYLDEL TPGFTPLLAI KEASRCLLCH DAPCSQDCPA QTDPGKFIRS IYFRNFKGAA 
ETIRENNALG AVCARVCPTE KLCQRGCTRS GIDKPIDIAR LQRFITDFEQ QTAMQIYQPG
SKTRGKVAII GAGPAGLQAS VTLTHLGYDV TIYEKQPQPG GWLRHGIPAF RLPQSVLDQE
IARIVEMGVN IKCNCDVGGS LSLAQLKAEY RAVLMTVGMS CGSDLPLFEQ ASHVEIAVDF
LQRARQADGD ISVPRSALII GGGDVAMDVA STLKILGCPS VTCVAREELA QFPASEKEFT
STQALGVSII DGFTPVAVSG NKVIFHHVRH SGELTLKAEN IILAVGQHAR LDTFAEIKAQ
HNIIDTHNYQ TDDPAIFAAG DIVKGDKTVV YAVKTGKEAA QAIHHYLEET CSC