Gene SNSL254_A2374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2374 
Symbol 
ID6485262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp2291451 
End bp2292170 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content52% 
IMG OID642737713 
Producthypothetical protein 
Protein accessionYP_002041455 
Protein GI194444390 
COG category[S] Function unknown 
COG ID[COG2949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAGC GCGTGTTTTA CAGCCTGTTG GTCCTGGTAG GCTTGCTGCT GTTGACGGTG 
CTTGGCCTCG ATCGGTGGAT GAGCTGGAAA ACAGCGCCCT ACATCTATGA CGAGCTACAG 
GATCTTCCCT ACCGCCAGGT TGGCGTCGTG TTAGGGACGG CCAAATACTA TCGCAAGGGT 
GTCATTAATC AGTACTATCG TTATCGTATC CAGGGCGCGT TAAACGCTTA CAATAGCGGT 
AAAGTCAATT ACCTGCTGCT CAGCGGCGAC AATGCCCTGC AAAGCTATAA CGAACCGATG 
ACCATGCGCA AAGACCTTAT CGCGGCGGGC GTCGATCCTG CGGACATTGT GCTTGATTAC 
GCTGGCTTCC GTACGCTTGA CTCCATTGTG CGTACCCGCA AAGTGTTTGA TACCAACGAC 
TTTATTATCA TCACTCAGCG CTTCCACTGC GAACGCGCCT TGTTTATTGC GTTGCATATG 
GGCATTCAGG CGCAGTGTTA CGCGGTACCT TCGCCCAAAA ATATGCTGAC AGTGCGCCTG 
CGCGAATTTG GCGCCCGCTT TAGCGCGCTG GCGGATCTCT ATATTTTTAA ACGCGAACCG 
CGTTTTTTAG GCCCGCTGGT ACCTATTCCC ACGCAGCATC AGGTGCCGAA TGACGCCCAG 
GGATATCCGG CCGTTACGCC GGAACAATTG CTTGAACTGG AAAAGAAAAA AGGGAAATGA
 
Protein sequence
MLKRVFYSLL VLVGLLLLTV LGLDRWMSWK TAPYIYDELQ DLPYRQVGVV LGTAKYYRKG 
VINQYYRYRI QGALNAYNSG KVNYLLLSGD NALQSYNEPM TMRKDLIAAG VDPADIVLDY 
AGFRTLDSIV RTRKVFDTND FIIITQRFHC ERALFIALHM GIQAQCYAVP SPKNMLTVRL 
REFGARFSAL ADLYIFKREP RFLGPLVPIP TQHQVPNDAQ GYPAVTPEQL LELEKKKGK