| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2369 |
|---|
| Symbol | |
|---|
| ID | 6484292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2286622 |
|---|
| End bp | 2287980 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642737709 |
|---|
| Product | 4-hydroxybenzoate transporter |
|---|
| Protein accession | YP_002041451 |
|---|
| Protein GI | 194443907 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00895] benzoate transport |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.708273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAC GACGTGATCT ACAAGCCCTT ATTGATGCCG CGCCCGTCGG CAAAATGCAG
TGGCGCGTTA TCATCTGCTG TTTTCTGGTG GTTATGCTCG ACGGTTTCGA CACCGCCGCG
ATTGGCTTCA TCGCCCCGGA TATTCGTACT CACTGGCAGC TAAGCGCCAG CGAACTTGCG
CCGCTGTTTG GCGCAGGGCT GCTGGGGCTT ACGGCCGGCG CGCTGCTATG CGGGCCGCTG
GCGGATCGCT TTGGCCGCAA GCGGGTCATT GAGCTTTGCG TGGCGCTATT CGGCGCATTG
AGCCTGCTTT CCGCTTTCTC GCCGGATATA GAAACCCTGG TGTTGCTGCG CTTCTTAACC
GGTCTGGGAC TGGGCGGAGC GATGCCGAAT ACCATCACCA TGACGTCGGA ATACCTTCCC
GCTCGTCGAC GCGGAGCGCT GGTCACGCTG ATGTTCTGCG GTTTTACCCT GGGGTCGGCG
ATGGGCGGGA TTGTGAGCGC GCAACTGGTG CCGCTGATTG GCTGGCACGG AATTCTGGCG
CTAGGCGGCA TCTTGCCTTT GATGCTGTTT TTCGGCCTGC TGTTCGCGCT GCCGGAATCT
CCCCGCTGGC AGGTACGCCG CCAACTACCG CAAGCCGTTG TCGCCCGGAC GGTCAGCGCC
ATTACCGGCG AGCGCTATCA CGATACGCAA TTCTTTCTGC ATGAGACGGC AGCCATCGCC
AAAGGCAGTA TTCGCCAGCT TTTTGCCGGG CGACAGCTTG TCATTACCCT GATGTTATGG
GTGGTGTTCT TTATGAGCCT GCTCATTATC TATCTGCTTT CCAGCTGGAT GCCGACGTTA
CTTAACCATC GCGGTATTGA TCTGCAACAG GCGTCGTGGG TGACTGCCGC ATTCCAGGTT
GGCGGCACGC TTGGCGCGCT GTTACTCGGC GTGTTGATGG ACCGGCTTAA CCCGTTCCGG
GTACTGGCGG TGAGCTATGC GCTGGGCGCA GTTTGCATTG TCATGATAGG CCTGAGCGAA
AACGGCCTTT GGCTGATGGC GCTGGCGATT TTTGGTACCG GCATCGGTAT TAGCGGTTCC
CAGGTAGGGC TTAATGCTCT GACGGCGACG CTGTACCCCA CCCAAAGCCG GGCGACGGGC
GTGAGCTGGT CGAACGCCAT TGGACGCTGC GGGGCGATTG TCGGTTCGCT CTCCGGCGGC
ATGATGATGG CCCTCAATTT CTCTTTCGAT ACGTTGTTTT TTGTCATTGC TATTCCGGCG
GCTATCAGCG CGGTAATGCT TACCCTGCTG ACGGTGGTTG TCCGCCTTTC GATTTCTGTA
CCTGACGACC TGCCGCGTGC CAGCGTCGTA AACGAATAA
|
|---|
| Protein sequence | MTQRRDLQAL IDAAPVGKMQ WRVIICCFLV VMLDGFDTAA IGFIAPDIRT HWQLSASELA
PLFGAGLLGL TAGALLCGPL ADRFGRKRVI ELCVALFGAL SLLSAFSPDI ETLVLLRFLT
GLGLGGAMPN TITMTSEYLP ARRRGALVTL MFCGFTLGSA MGGIVSAQLV PLIGWHGILA
LGGILPLMLF FGLLFALPES PRWQVRRQLP QAVVARTVSA ITGERYHDTQ FFLHETAAIA
KGSIRQLFAG RQLVITLMLW VVFFMSLLII YLLSSWMPTL LNHRGIDLQQ ASWVTAAFQV
GGTLGALLLG VLMDRLNPFR VLAVSYALGA VCIVMIGLSE NGLWLMALAI FGTGIGISGS
QVGLNALTAT LYPTQSRATG VSWSNAIGRC GAIVGSLSGG MMMALNFSFD TLFFVIAIPA
AISAVMLTLL TVVVRLSISV PDDLPRASVV NE
|
|---|
| |