Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2364 |
Symbol | |
ID | 6482628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2281948 |
End bp | 2282943 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642737704 |
Product | tRNA-dihydrouridine synthase C |
Protein accession | YP_002041446 |
Protein GI | 194444008 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTCATCG CAGAGAGGCG TTATGATAGC GCCTCTTTTT TTGCTGTGGA TACCGATATG CGTGTTTTAC TGGCGCCGAT GGAAGGCGTG CTCGACGCGT TAGTGCGCGA GCTGCTGACC GAAGTGAATG ATTACGATCT CTGCATCACC GAATTTGTGC GCGTGGTGGA TCAGCTGCTG CCGGTAAAAG TGTTTCATCG CATCTGCCCG GAGTTGCATC ACGCCAGCCG CACGCCGTCC GGTACGCCGG TGCGTATTCA GCTTCTGGGC CAGCATCCGC AGTGGCTGGC GGAAAACGCC GCGCGGGCGA CGGCGTTGGG ATCGTATGGC GTGGACCTGA ACTGCGGCTG TCCGTCAAAA GTGGTGAACG GCAGCGGCGG CGGCGCGACA TTGCTCAAAG ATCCCGAACT CATCTATCAG GGCGCGAAAG CGATGCGGGC CGCGGTACCG TCGCATCTGC CGGTGACGGT AAAAGTGCGT CTCGGCTGGG ATAGCGGCGA TAGAAAATTT GAAATCGCCG ATGCGGTGCA GCAGGCTGGC GCCAGTGAAC TGGTGGTGCA TGGTCGTACC AAAGCGCAGG GCTACCGCGC CGAGCATATC GACTGGCAGG CGATCGGCGA AATACGCCAG CGTCTGACTA TTCCGGTTAT CGCTAATGGC GAAATCTGGG ACTGGCAGAG CGCGCAGGCA TGTATGGCGA CCAGCGGCTG CGATGCGGTG ATGATCGGCC GTGGGGCGTT AAATATTCCT AACCTGAGCC GGGTGGTGAA GTATAACGAG CCGCGTATGC CGTGGCCGGA AGTGGTGACG TTATTACAAA AATATACCCG ACTGGAAAAG CAGGGCGATA CCGGTTTATA TCATGTCGCG CGTATTAAAC AGTGGTTGGG ATATTTACGT AAGGAATATA TTGAGGCGAC GGAACTCTTT CAGTCGATTC GGGCGTTAAA CCGTTCATCC GAGATTGCGC GGGCGATTCA GGCTATTAAA ACCTAA
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Protein sequence | MLIAERRYDS ASFFAVDTDM RVLLAPMEGV LDALVRELLT EVNDYDLCIT EFVRVVDQLL PVKVFHRICP ELHHASRTPS GTPVRIQLLG QHPQWLAENA ARATALGSYG VDLNCGCPSK VVNGSGGGAT LLKDPELIYQ GAKAMRAAVP SHLPVTVKVR LGWDSGDRKF EIADAVQQAG ASELVVHGRT KAQGYRAEHI DWQAIGEIRQ RLTIPVIANG EIWDWQSAQA CMATSGCDAV MIGRGALNIP NLSRVVKYNE PRMPWPEVVT LLQKYTRLEK QGDTGLYHVA RIKQWLGYLR KEYIEATELF QSIRALNRSS EIARAIQAIK T
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