Gene SNSL254_A2360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2360 
Symbol 
ID6484308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2279226 
End bp2279987 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content55% 
IMG OID642737700 
Productacetoin dehydrogenase 
Protein accessionYP_002041442 
Protein GI194443879 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAG TCGCAATTGT AACGGCATCA GATTCGGGAA TTGGCAAAGC GTGTGCGTTG 
TTATTAGCAC AAAACGGTTT TGATATTGGT ATCACCTGGC ATTCCGATGA ACGCGGCGCG
CAGGAGACGG CAAAAAAAGC GGCGCAGTTT GGTGTGCGGG CAGAGACCAT TCATCTTGAC
CTGAGCCAGT TACCCGAGGG CGCGCAGGCC ATTGAACATC TTATTCAGCG CCTGGGGCGC
GTTGACGTGC TGGTCAATAA TGCCGGGGCG ATGACCAAAT CCGCGTTTAT TGATATGCCG
TTTACGCAGT GGCGGCAAAT TTTTACCGTG GACGTCGATG GCGCGTTTCT CTGCGCGCAG
ATCGCCGCCC GGCATATGAT TAAACAAGGA GAGGGAGGGC GCATTATCAA CATCACCTCC
GTCCATGAGC ATACGCCGCT TCCGCAAGCC AGCGCCTATA CCGCGGCGAA ACATGCGTTG
GGGGGATTGA CTAAATCCAT GGCGCTGGAA CTGATTGAGC ATCATATTTT GGTCAACGCC
GTCGCGCCAG GCGCTATCGC CACGCCGATG AATGATATGG ATGACAGCGA CATTGAGCCG
GGATCGGAAC CCTCGATCCC TATCGCCCGA CCGGGTTCTA CGCATGAAAT AGCCAGCCTC
GTCGCCTGGC TGTGTTCGGA AGGCGCAAGC TATACCACCG GTCAGTCGCT GATTGTCGAC
GGCGGGTTTA TGCTGGCGAA TCCGCAATTC AACGCAAAAT AA
 
Protein sequence
MTKVAIVTAS DSGIGKACAL LLAQNGFDIG ITWHSDERGA QETAKKAAQF GVRAETIHLD 
LSQLPEGAQA IEHLIQRLGR VDVLVNNAGA MTKSAFIDMP FTQWRQIFTV DVDGAFLCAQ
IAARHMIKQG EGGRIINITS VHEHTPLPQA SAYTAAKHAL GGLTKSMALE LIEHHILVNA
VAPGAIATPM NDMDDSDIEP GSEPSIPIAR PGSTHEIASL VAWLCSEGAS YTTGQSLIVD
GGFMLANPQF NAK