| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2357 |
|---|
| Symbol | pbpG |
|---|
| ID | 6485870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2276750 |
|---|
| End bp | 2277697 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642737697 |
|---|
| Product | D-alanyl-D-alanine endopeptidase |
|---|
| Protein accession | YP_002041439 |
|---|
| Protein GI | 194445434 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAAT TCCGAGCTTC ATTCCTGAGC CTTGCTCTGA TGTTGGCCGT TCCTTTTGCC
CCGCAGGCTG TGGCGAAAAC GGCAGCGACA ACCGCGGCGT CTCAACCTGA GATTGCCTCC
GGTAGCGCAA TGATTGTTGA TCTCAACACC AATAAAGTGA TCTATTCGAA CCACCCGGAT
CTGGTGCGTC CGATTGCCTC GATAACCAAA TTAATGACAG CGATGGTCGT GCTCGACGCG
CGATTGCCGC TGGATGAAAT ACTGAAGGTC GATATCAGCC AGACGCCGGA AATGAAAGGG
GTTTACTCCC GCGTGCGCCT GAACAGCGAA ATTAGCCGCA AAAATATGTT GCTGCTGGCG
TTGATGTCAT CCGAAAACCG TGCGGCGGCA AGCCTGGCGC ACTATTATCC TGGCGGTTAT
AACGCGTTTA TTAAAGCAAT GAATGCGAAG GCGAAAGCGC TGGGCATGAC GCATACCCGC
TTCGTTGAGC CGACGGGGCT GTCGATTCAT AACGTCTCGA CCGCGCGGGA TTTAACAAAA
TTGCTGATTG CCACGAAGCA ATACCCGCTG ATTGGCCAGC TAAGCACCAC GCGCGAAGAT
ATGGCGACAT TCTCGCATCC TGCGTATACG CTGCCGTTTC GCAATACCAA CCATTTGGTC
TATCGTGATA ACTGGAATAT CCAGTTAACG AAAACCGGCT TTACCAATGC GGCGGGGCAT
TGCCTGGTGA TGCGTACCGT GATCAATAAC AAACCGGTCG CGCTGGTGGT CATGGACGCG
TTCGGCAAAT ATACCCACTT TGCGGACGCC AGTCGCCTGC GTACATGGAT TGAAACCGGT
AAAGTCATGC CCGTTCCGGC TGCCGCGCTG AGCTATAAAA AGCAAAAAGC CGCGCAAATG
GCGGCAGCCA GCGCCAGCGC CGGAGCGCAA ACCGCACAGA ACGATTAA
|
|---|
| Protein sequence | MLKFRASFLS LALMLAVPFA PQAVAKTAAT TAASQPEIAS GSAMIVDLNT NKVIYSNHPD
LVRPIASITK LMTAMVVLDA RLPLDEILKV DISQTPEMKG VYSRVRLNSE ISRKNMLLLA
LMSSENRAAA SLAHYYPGGY NAFIKAMNAK AKALGMTHTR FVEPTGLSIH NVSTARDLTK
LLIATKQYPL IGQLSTTRED MATFSHPAYT LPFRNTNHLV YRDNWNIQLT KTGFTNAAGH
CLVMRTVINN KPVALVVMDA FGKYTHFADA SRLRTWIETG KVMPVPAAAL SYKKQKAAQM
AAASASAGAQ TAQND
|
|---|
| |