Gene SNSL254_A2341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2341 
Symbol 
ID6486756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2258318 
End bp2258851 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content40% 
IMG OID642737681 
Productputative fimbrial subunit protein 
Protein accessionYP_002041423 
Protein GI194446173 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.732108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTT CACTTATTGC TGCTTCTGTA TTGTCTGCTG TATTTATGAG CGCTGGGGTT 
TTTGCTGCTG ATGAAGATAT GGGAGAATTA AAAATAAACG GAGAAGTGGT GGGAACATCC
TGTACTTTCG AAGGTGCAAA TAGCGCGACT ATTGAATTAT CCCAGGTAGG TGTTGATAGA
TTGACTGACT TAAACCCTGG CGATATATAT ACAGGATACA CTAGCCCAGA GGCGATTTTA
AAAGTAAAAT GTACGAATAC AGCTAATCCA CGAATTAGTT TTAACCGTTC TCAATTTGTG
GATAATATGC AAATCACCAA AAATAATGCT ACTAATAATG GTGCGGGCTT CGCTGTTTAT
CTTGATGGTA CTCAGGTGAA ACCGGATGAG GCGGGGAATT ACACTCTGAA TTCAAGTAAG
TTTGAAAATG GTGTATATAC CCTGAACTTT TCTGCCCGCT ATGCCGCCGT TGAAAATACT
GTAACACCAG GTTCTGTTGA ATCTGTACTG ACGATGACGG TATTAACTGA TTAA
 
Protein sequence
MKRSLIAASV LSAVFMSAGV FAADEDMGEL KINGEVVGTS CTFEGANSAT IELSQVGVDR 
LTDLNPGDIY TGYTSPEAIL KVKCTNTANP RISFNRSQFV DNMQITKNNA TNNGAGFAVY
LDGTQVKPDE AGNYTLNSSK FENGVYTLNF SARYAAVENT VTPGSVESVL TMTVLTD