Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2341 |
Symbol | |
ID | 6486756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2258318 |
End bp | 2258851 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 642737681 |
Product | putative fimbrial subunit protein |
Protein accession | YP_002041423 |
Protein GI | 194446173 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.732108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTT CACTTATTGC TGCTTCTGTA TTGTCTGCTG TATTTATGAG CGCTGGGGTT TTTGCTGCTG ATGAAGATAT GGGAGAATTA AAAATAAACG GAGAAGTGGT GGGAACATCC TGTACTTTCG AAGGTGCAAA TAGCGCGACT ATTGAATTAT CCCAGGTAGG TGTTGATAGA TTGACTGACT TAAACCCTGG CGATATATAT ACAGGATACA CTAGCCCAGA GGCGATTTTA AAAGTAAAAT GTACGAATAC AGCTAATCCA CGAATTAGTT TTAACCGTTC TCAATTTGTG GATAATATGC AAATCACCAA AAATAATGCT ACTAATAATG GTGCGGGCTT CGCTGTTTAT CTTGATGGTA CTCAGGTGAA ACCGGATGAG GCGGGGAATT ACACTCTGAA TTCAAGTAAG TTTGAAAATG GTGTATATAC CCTGAACTTT TCTGCCCGCT ATGCCGCCGT TGAAAATACT GTAACACCAG GTTCTGTTGA ATCTGTACTG ACGATGACGG TATTAACTGA TTAA
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Protein sequence | MKRSLIAASV LSAVFMSAGV FAADEDMGEL KINGEVVGTS CTFEGANSAT IELSQVGVDR LTDLNPGDIY TGYTSPEAIL KVKCTNTANP RISFNRSQFV DNMQITKNNA TNNGAGFAVY LDGTQVKPDE AGNYTLNSSK FENGVYTLNF SARYAAVENT VTPGSVESVL TMTVLTD
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