Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2334 |
Symbol | thiM |
ID | 6484665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2252458 |
End bp | 2253255 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642737675 |
Product | hydroxyethylthiazole kinase |
Protein accession | YP_002041417 |
Protein GI | 194446654 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2145] Hydroxyethylthiazole kinase, sugar kinase family |
TIGRFAM ID | [TIGR00694] hydroxyethylthiazole kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.474339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCTG ACCTGCACTG CCGCACGCTT GCGGCGCATA CGTTAAAACA CTTTCGCGCG CTCTCCCCGC TTACGCACTG TATGACGAAT GACGTCGTAC AAACGTTTAC CGCCAATACG TTGCTGGCGC TGGGCGCTTC ACCCGCCATG GTGATTGATC CTGTCGAGGC CAGACCGTTT GCCGCCATCG CCAACGCCTT GCTGATTAAT GTCGGAACAT TAACTGCCTC ACGCGCTGAC GCGATGCGTG CGGCGGTAGA AAGCGCTTAT GATGCCAAAA CGCCGTGGAC GCTTGATCCT GTCGCGGTGG GCGCGCTGGA ATTTCGTCGG CGATTTTGCC TGGATCTCTT GTCCCTGCGC CCGGCGGCAA TACGCGGCAA CGCCTCGGAA ATCCTGGCGT TATCCGGCAT GGCGCTGGGC GGACGCGGCG TAGATACCAC CGAGGCGGCG TTGGCCGCAC TGCCTGCGGC GCAGGCGCTG GCGCGTCAGA TAGACTGCAT CGTTGTGGTT ACCGGAGAGG TAGATTACGT CACTAATGGT CAGCGCACGC TGAGCATTCC CGGCGGCGAT CCGTTAATGA CTCGCATTGT AGGCACCGGC TGCGCGTTGT CGGCGGTCGT CGCCGCCAGT TGCGCGTTAC CGGGCGCCGC GCTGGACAAT GTCGCGTCGG CCTGCTGCTG GATGAAACTG GCTGGACAGG CCGCGGCAGA GCGTAGCGAA GGACCGGGCA GCTTCATCCC GGCTTTTCTT GATGCGCTCT ATCATCTGGA TGTGGAGGCG GCCAATGCAA CGAATTAA
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Protein sequence | MQPDLHCRTL AAHTLKHFRA LSPLTHCMTN DVVQTFTANT LLALGASPAM VIDPVEARPF AAIANALLIN VGTLTASRAD AMRAAVESAY DAKTPWTLDP VAVGALEFRR RFCLDLLSLR PAAIRGNASE ILALSGMALG GRGVDTTEAA LAALPAAQAL ARQIDCIVVV TGEVDYVTNG QRTLSIPGGD PLMTRIVGTG CALSAVVAAS CALPGAALDN VASACCWMKL AGQAAAERSE GPGSFIPAFL DALYHLDVEA ANATN
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