| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2315 |
|---|
| Symbol | |
|---|
| ID | 6482612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 2233135 |
|---|
| End bp | 2234547 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642737659 |
|---|
| Product | multidrug efflux system protein MdtE |
|---|
| Protein accession | YP_002041401 |
|---|
| Protein GI | 194443126 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAC TTCCTGACAA CACCCGCTGG CAACTCTGGA TTGTGGCATT CGGCTTTTTT
ATGCAGTCGC TGGATACCAC CATCGTCAAC ACTGCGCTGC CCTCCATGGC GAAAAGCCTG
GGGGAAAGCC CGCTGCATAT GCACATGGTA GTGGTGTCAT ATGTTCTTAC CGTCGCCGTG
ATGCTCCCCG CCAGCGGCTG GCTGGCAGAC AAAATCGGCG TGCGTAATAT TTTCTTTGCC
GCCATTGTGC TGTTCACGCT GGGTTCGCTG TTTTGCGCCC TTTCCGGCAC GCTTAATCAA
CTGGTATTAG CGCGGGTTTT ACAAGGCGTA GGCGGCGCGA TGATGGTGCC GGTCGGACGC
CTGACGGTCA TGAAAATCGT GCCGCGCGCG CAATATATGG CGGCGATGAC CTTCGTCACC
CTACCGGGAC AGATCGGGCC GTTACTCGGC CCCGCGCTGG GCGGGGTGCT GGTGGAATAT
GCTTCATGGC ACTGGATCTT TCTGATCAAT ATCCCGGTGG GAATTGTCGG CGCTATGGCA
ACCTTTATGC TGATGCCAAA CTACACCATA GAGACCCGGC GCTTTGATCT GCCGGGGTTC
CTGCTGTTAG CTATCGGCAT GGCGGTACTC ACGCTGGCGC TGGACGGTAG TAAAAGCATG
GGGATTTCGC CCTGGACATT AGCCGGACTT GCTGCGGGCG GCGCGGCAGC CATTCTGCTC
TATCTCTTCC ATGCCAAAAA AAACTCAGGC GCGTTATTCA GCCTGCGATT GTTCCGCACG
CCCACGTTTT CACTGGGGTT GCTGGGCAGT TTTGCCGGGC GTATCGGCAG CGGTATGCTG
CCGTTTATGA CGCCGGTCTT TTTGCAAATT GGTCTTGGTT TTTCACCGTT TCATGCCGGT
TTGATGATGA TTCCCATGGT GCTGGGCAGC ATGGGAATGA AGCGGATTGT AGTGCAGATA
GTTAACCGTT TTGGCTATCG TCGGGTTCTG GTGGCGACTA CGCTCGGACT GGCATTGGTT
AGCCTGTTGT TTATGTCGGT CGCGCTGCTC GGCTGGTATT ATCTCCTGCC GCTGGTACTG
CTTTTGCAGG GAATGGTGAA CTCGGCGCGC TTTTCTTCCA TGAATACCTT AACGCTAAAA
GACCTTCCCG ATACGCTGGC CAGCAGCGGC AATAGCTTAT TATCGATGAT TATGCAGCTC
TCGATGAGTA TCGGCGTCAC TATTGCCGGA ATGCTGCTGG GTATGTTTGG CCAACAGCAT
ATCGGGATAG ACAGTAGCGC CACACATCAC GTCTTTATGT ACACCTGGTT ATGTATGGCG
GTTATTATCG CGCTACCGGC GATAATTTTT GCCCGCGTGC CGAACGATAC ACAGCAAAAC
ATGGTCATTT CACGGCGTAA AAGGAGCCTG TAA
|
|---|
| Protein sequence | MTELPDNTRW QLWIVAFGFF MQSLDTTIVN TALPSMAKSL GESPLHMHMV VVSYVLTVAV
MLPASGWLAD KIGVRNIFFA AIVLFTLGSL FCALSGTLNQ LVLARVLQGV GGAMMVPVGR
LTVMKIVPRA QYMAAMTFVT LPGQIGPLLG PALGGVLVEY ASWHWIFLIN IPVGIVGAMA
TFMLMPNYTI ETRRFDLPGF LLLAIGMAVL TLALDGSKSM GISPWTLAGL AAGGAAAILL
YLFHAKKNSG ALFSLRLFRT PTFSLGLLGS FAGRIGSGML PFMTPVFLQI GLGFSPFHAG
LMMIPMVLGS MGMKRIVVQI VNRFGYRRVL VATTLGLALV SLLFMSVALL GWYYLLPLVL
LLQGMVNSAR FSSMNTLTLK DLPDTLASSG NSLLSMIMQL SMSIGVTIAG MLLGMFGQQH
IGIDSSATHH VFMYTWLCMA VIIALPAIIF ARVPNDTQQN MVISRRKRSL
|
|---|
| |