Gene SNSL254_A2297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2297 
Symbol 
ID6483122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2209381 
End bp2210292 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content52% 
IMG OID642737643 
Productputative glycosyl transferase 
Protein accessionYP_002041385 
Protein GI194445126 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.038696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.220934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGC CTGTGACTGT AGGCCGGACA AGCGTAGCGC CATGCGGCAA AACTATCTGG 
GGAATAAGCA TGACAACAGA CACTCCGCTG ATCTCAATTT ATATGCCAAC CTGGAACAGG
CAGCAGTTGG CTATCCGGGC GATTAAATCA GTACTACGTC AGGACTACCG CCACTGGGAG
ATGATCATCG TGGATGATTG CTCCTCGTCT TATCAGCAGC TACAACAATT TGTTGAGGAG
CTGAACGACC CGCGCGTCCG TTATACCCAT AACGCCAGGA ATACCGGCGC CTGCGCGGTT
CGCAACCAGG CCATTATGCA GGCGCAAGGA CACTACATTA CCGGTATTGA TGATGACGAT
GAATGGACGC CAAACCGTCT GAGCGTGTTT CTGGCCCATA AACACCAGTT GACTACGCAC
GCCTTTTTGT ATGCCAACGA CTATGTGTGC GAGGGCGAGG TCTACTCTCA GCCTGCCAGC
CTGCCGCTGT ATCCGAAATC CCCTTATTCG CGCCGCTTGT TCTACAAGCG CAATATTATT
GGCAATCAGG TTTTTACCTG GGCCTGGCGT TTTAAAGCGT GTTTGTTCGA TACCGAACTC
AAGGCGGCGC AGGATTACGA CATTTTTCTG CGCATGGTGG TGGAGTATGG CGAACCGTGG
AAAGTTGAAG AGGCGACGCA AATTTTACAT ATCAACCACG GCGAGATGCA GATTACCTCT
TCGCCGAAAA AGTTCTCCGG CTATTTCCAT TTTTATCGTA AGCACAAAGA TAAATTCGAT
CGCGCCAGCA AAAAATACCA GCTTTTTACG CTGTACCAAA TTCGCAATAA GCGAATGACC
TGGCGCACGT TGCTGACGTT GCTCTCCGTG CGTAACAGCA AACGCCTGGC GGCCGGGCTG
CGGGGGCGAT AA
 
Protein sequence
MARPVTVGRT SVAPCGKTIW GISMTTDTPL ISIYMPTWNR QQLAIRAIKS VLRQDYRHWE 
MIIVDDCSSS YQQLQQFVEE LNDPRVRYTH NARNTGACAV RNQAIMQAQG HYITGIDDDD
EWTPNRLSVF LAHKHQLTTH AFLYANDYVC EGEVYSQPAS LPLYPKSPYS RRLFYKRNII
GNQVFTWAWR FKACLFDTEL KAAQDYDIFL RMVVEYGEPW KVEEATQILH INHGEMQITS
SPKKFSGYFH FYRKHKDKFD RASKKYQLFT LYQIRNKRMT WRTLLTLLSV RNSKRLAAGL
RGR