| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2291 |
|---|
| Symbol | gmd |
|---|
| ID | 6486301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2204013 |
|---|
| End bp | 2205134 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642737637 |
|---|
| Product | GDP-mannose 4,6-dehydratase |
|---|
| Protein accession | YP_002041379 |
|---|
| Protein GI | 194444571 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1089] GDP-D-mannose dehydratase |
|---|
| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.76213 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 0.0141464 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAG TCGCTCTCAT TACTGGCGTA ACCGGACAGG ATGGGGCTTA CCTGGCAGAA
TTTCTGCTGG AAAAAGGGTA TGAGGTGCAT GGTATCAAGC GTCGCGCGTC ATCGTTTAAT
ACCGAGCGCG TGGACCATAT TTATCAGGAC CCGCACAGCT GCAACCCGAA ATTTCATCTG
CATTACGGCG ACCTCACCGA CGCCTCCAAC CTGACCCGCA TTTTACAGGA AGTGCAGCCG
GATGAGGTCT ACAACCTGGG CGCGATGAGC CACGTGGCGG TGTCGTTTGA GTCGCCGGAA
TATACCGCCG ATGTGGATGC GATGGGCACG CTGCGCCTGC TGGAGGCGAT TCGCTTCCTC
GGTCTTGAAA AGAAAACGCG TTTCTACCAG GCCTCCACCT CTGAACTGTA CGGGCTGGTG
CAGGAAATTC CGCAGAAAGA GACCACGCCG TTCTACCCGC GTTCCCCCTA TGCGGTGGCG
AAACTGTACG CCTACTGGAT CACCGTCAAC TACCGTGAAT CCTACGGTAT TTACGCCTGT
AACGGCATTC TGTTTAACCA TGAGTCCCCG CGTCGCGGCG AAACCTTCGT CACCCGTAAG
ATCACCCGCG CCATCGCCAA TATCGCCCAG GGACTGGAGT CCTGCCTGTA TCTCGGCAAC
ATGGACTCGC TGCGCGACTG GGGTCATGCG AAAGATTACG TGCGGATGCA GTGGATGATG
TTACAGCAGG AGCAGCCGGA AGATTTCGTG ATTGCCACCG GCGTGCAGTA TTCCGTACGC
CAGTTTGTGG AGCTGGCGGC GGCGCAACTG GGGATAAAAC TGCGCTTTGA AGGCGAAGGC
ATTAATGAGA AAGGGATTGT GGTATCCGTT ACCGGACACG ATGCGCCGGG CGTGAAACCG
GGCGATGTGA TTGTGGCCGT TGATCCGCGT TATTTCCGTC CGGCGGAAGT GGAAACCCTG
CTGGGCGATC CGTCCAAAGC GCATGAGAAA CTGGGCTGGA AACCGGAAAT CACCCTGTCG
GAGATGGTCT CGGAGATGGT GGCGAACGAT CTGGAGGCCG CGAAAAAACA CTCACTGCTG
AAATCTCACG GTTACGAGGT GGCCATCGCG CTGGAGTCCT GA
|
|---|
| Protein sequence | MSKVALITGV TGQDGAYLAE FLLEKGYEVH GIKRRASSFN TERVDHIYQD PHSCNPKFHL
HYGDLTDASN LTRILQEVQP DEVYNLGAMS HVAVSFESPE YTADVDAMGT LRLLEAIRFL
GLEKKTRFYQ ASTSELYGLV QEIPQKETTP FYPRSPYAVA KLYAYWITVN YRESYGIYAC
NGILFNHESP RRGETFVTRK ITRAIANIAQ GLESCLYLGN MDSLRDWGHA KDYVRMQWMM
LQQEQPEDFV IATGVQYSVR QFVELAAAQL GIKLRFEGEG INEKGIVVSV TGHDAPGVKP
GDVIVAVDPR YFRPAEVETL LGDPSKAHEK LGWKPEITLS EMVSEMVAND LEAAKKHSLL
KSHGYEVAIA LES
|
|---|
| |