Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2290 |
Symbol | fcl |
ID | 6485958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2203045 |
End bp | 2204010 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642737636 |
Product | GDP-L-fucose synthetase |
Protein accession | YP_002041378 |
Protein GI | 194446235 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.711318 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.0100272 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAAGC AACGAATTTT TGTGGCGGGC CATCGCGGAA TGGTGGGCTC CGCCATTGTA CGGCAGCTTG CGCCGCGCGG CGACGTGGAA CTGATGCTGC GCACCCGCGA TGAGCTGGAT CTGCTCGACG GGCGCGCGGT ACAGGCGTTC TTTGCCGGGG CGGGTATCGA CCAGGTTTAT CTGGCGGCGG CGAAAGTGGG CGGCATTGTC GCCAACAACA CGTATCCGGC GGATTTTATT TATGAAAACA TGATGATAGA GAGCAACATT ATTCACGCCG CGCACCTGCA CAACGTGAAC AAACTGCTGT TTCTCGGTTC GTCCTGTATC TATCCGAAAC TGGCAAGGCA GCCGATGGCG GAAAGCGAGC TGCTGCAGGG GACGCTGGAG CCGACCAACG AGCCGTATGC CATCGCCAAG ATCGCCGGGA TTAAACTGTG CGAGTCCTAC AACCGGCAGT ACGGTCGCGA CTACCGTTCG GTGATGCCAA CCAACCTGTA CGGCCCGCAT GATAATTTCC ATCCGGACAA TTCACATGTG ATCCCGGCGC TGCTGCGCCG CTTTCATGAG GCCGCACAGA GCCACGCGCC GGAGGTGGTG GTGTGGGGCA GCGGCACGCC GATGCGCGAA TTTCTGCACG TTGACGATAT GGCGGCGGCC AGCATTCACG TGATGGAGCT GGCGCGCGAA GTGTGGCAGG AGAACACCGA CCCGATGCTG TCGCACATTA ACGTCGGCAC TGGCGTGGAC TGCACCATTC GCGAGCTGGC GCAGACCATC GCAAAGGTGG TGGGTTACCA GGGCCGGGTG GTGTTCGACG CCGCGAAGCC GGACGGCACG CCGCGTAAAT TGCTCGACGT CACGCGCCTG CATCAGCTTG GCTGGTATCA CGAAATTTCA CTGGAGGCAG GGCTTGCCGG TACTTACCAG TGGTTCCTTG AGAATCAGCA ACGGTTCCGG GGGTGA
|
Protein sequence | MNKQRIFVAG HRGMVGSAIV RQLAPRGDVE LMLRTRDELD LLDGRAVQAF FAGAGIDQVY LAAAKVGGIV ANNTYPADFI YENMMIESNI IHAAHLHNVN KLLFLGSSCI YPKLARQPMA ESELLQGTLE PTNEPYAIAK IAGIKLCESY NRQYGRDYRS VMPTNLYGPH DNFHPDNSHV IPALLRRFHE AAQSHAPEVV VWGSGTPMRE FLHVDDMAAA SIHVMELARE VWQENTDPML SHINVGTGVD CTIRELAQTI AKVVGYQGRV VFDAAKPDGT PRKLLDVTRL HQLGWYHEIS LEAGLAGTYQ WFLENQQRFR G
|
| |