Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2265 |
Symbol | |
ID | 6484359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2175166 |
End bp | 2176176 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642737612 |
Product | second mannosyl transferase |
Protein accession | YP_002041354 |
Protein GI | 194443692 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0000285845 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATAATA AAAAGGTTTT GATGGATATT AGTTGGTCTA ATAAAGGGGG GATTGGACGT TTTACTGATG AAATTTCTAA ACTACTATGT GATATATCTA AGGAGGAACT ATATAGAAAA TGTGCTTCTC CGCTGGCCCC ATTAGGTTTA GCAGTCAATA TTTTTCTGCG AAAGAAAACT GATGTGGTTT TTCTTCCTGG CTATATTCCA CCACTTTTTT GTTCGAAAAA GTTCATAATA ACAATACATG ATCTAAATCA TCTGGATTTA AATGATAATT CCTCTCTTTT TAAGAGGTTA TTTTATAATT TTATAATAAA GCGCGGTTGT AGAAAAGCAT ATAAAATATT TACAGTTTCG AATTTTTCAA AAGAAAGAAT AGTAGCATGG TCAGGTGTAA ACCCTAATAA AATAGTCACG GTATATAATG GGGTATCTAG TCTATTTAAT GCCGATGTAA AACCATTGAA TTTAGGCTAT AAATATTTGC TATGTGTAGG AAACAGAAAA ACTCATAAGA ATGAGAAGTG TGTTATATCT GCCTTTGCCA AAGCAGATAT TGATCCATCA ATAAAACTCG TTTTTACTGG TAATCCTTGT AATGATTTAG AAAAACTAAT AATACAACAT GGTTTAAGTG AACGTGTAAA GTTCTTTGGG TTCGTGTCTG AAAAAGATTT ACCATCGTTA TATAAGGGCT CGTTAGGATT AGTTTTCCCT TCTTTATATG AAGGTTTTGG ATTACCTGTA GTGGAGGGCA TGGCCTGTGG TATTCCTGTA TTAACTTCTC TAACTTCATC ATTGCCAGAG GTGGCTGGAG ATGCAGCGAT TCTTGTCGAC CCTCTTTCGG AAGATGCTAT TACTAAAGGA ATTTCGAGGT TAATTAATGA TTCTGAACTT CGTAAGCATT TAATCCAAAA GGGGCTTTTG CGGGCAAAGA GGTTCAATTG GCAAAACGTG GTTAGTGAGA TTGAAATGGT ACTGACAGAG GCATGTGATG GAAATAAATG A
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Protein sequence | MNNKKVLMDI SWSNKGGIGR FTDEISKLLC DISKEELYRK CASPLAPLGL AVNIFLRKKT DVVFLPGYIP PLFCSKKFII TIHDLNHLDL NDNSSLFKRL FYNFIIKRGC RKAYKIFTVS NFSKERIVAW SGVNPNKIVT VYNGVSSLFN ADVKPLNLGY KYLLCVGNRK THKNEKCVIS AFAKADIDPS IKLVFTGNPC NDLEKLIIQH GLSERVKFFG FVSEKDLPSL YKGSLGLVFP SLYEGFGLPV VEGMACGIPV LTSLTSSLPE VAGDAAILVD PLSEDAITKG ISRLINDSEL RKHLIQKGLL RAKRFNWQNV VSEIEMVLTE ACDGNK
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