| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2263 |
|---|
| Symbol | |
|---|
| ID | 6483199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2172586 |
|---|
| End bp | 2174007 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 642737610 |
|---|
| Product | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| Protein accession | YP_002041352 |
|---|
| Protein GI | 194442640 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase |
|---|
| TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.000496774 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAAT TAATACCAGT AATAATGGCC GGTGGGATTG GTAGCCGTTT GTGGCCACTT
TCACGTGAAG AGCATCCGAA ACAGTTTTTA AGCGTAGATG GTGAATTATC TATGCTGCAA
AACACCATTA AAAGATTGAC TCCTCTTTTG GCTGGAGAAC CTTTAGTCAT TTGTAATGAT
AGTCACCGCT TCCTTGTCGC TGAACAACTT CGAGCTATAA ATAAACTAGC AAATAACATC
ATATTAGAGC CAGTGGGGCG TAATACAGCC CCAGCTATAG CGCTGGCCGC TTTTTGTTCA
CTTCAGAATG TCGTCGATGA AGACCCGCTT TTGCTTGTCC TTGCTGCGGA TCATGTCATC
CGCGATGAGA AAGTGTTTCT TAAAGCTATC AATCACGCTG AATTTTTTGC AACACAAGGT
AAGCTAGTAA CGTTTGGTAT TGTACCCACA CAGGCCGAAA CTGGCTACGG TTATATTTGT
AGAGGTGAAG CAATCGGGGA AGATGCTTTT TCTGTAGCCG AATTTGTAGA GAAGCCTGAT
TTCGATACAG CGCGTCATTA TGTAGAATCA GAGAAATATT ATTGGAACAG CGGTATGTTC
CTATTTCGTG CAAGTAGTTA CTTACAAGAA TTAAAGGATC TGTCCCCCGA TATTTACCAA
GCATGTGAAA ATGCGGTAGG GAGTATTAAT CCTGATCTTG ATTTTATCCG TATTGATAAA
GAAGCATTCG CAATGTGCCC TAGTGATTCT ATCGATTATG CGGTAATGGA ACATACTAGG
CATGCAGTTG TCGTACCGAT GAATGCCGGC TGGTCAGATG TGGGGTCATG GTCTTCACTG
TGGGATATTT CTAAGAAAGA TCCACAACGT AATGTATTAC ATGGCGATAT TTTTGCATAT
AATAGTAAAG ATAATTATAT CTATTCTGAA AAATCGTTTA TTAGTACAAT CGGAGTAAAT
AATTTAGTTA TCGTGCAGAC AGCAGATGCA TTATTAGTAT CTGATAAAGA TTCAGTCCAG
GATGTTAAAA AAGTTGTTGA TTATTTAAAA GCTAATAATA GAAACGAACA TAAAAAACAT
TTAGAGGTTT TCCGACCGTG GGGAAAATTT AGCGTAATTC ATAGTGGCGA TAATTATTTA
GTTAAAAGAA TAACTGTTAA ACCAGGCGCG AAGTTTGCTG CTCAGATGCA TCTCCATCGT
GCTGAGCATT GGATAGTGGT ATCTGGTACT GCTTGTATTA CTAAGGGGGA AGAAATTTTT
ACAATTTCGG AGAATGAATC AACATTTATA CCTGCTAATA CAGTTCATAC GTTAAAAAAC
CCCGCGACTA TTCCATTAGA ACTAATAGAA ATTCAATCTG GCACCTATCT TGCGGAGGAT
GATATTATTC GCCTGGAGAA ACATTCTGGA TATCTGGAGT AA
|
|---|
| Protein sequence | MSKLIPVIMA GGIGSRLWPL SREEHPKQFL SVDGELSMLQ NTIKRLTPLL AGEPLVICND
SHRFLVAEQL RAINKLANNI ILEPVGRNTA PAIALAAFCS LQNVVDEDPL LLVLAADHVI
RDEKVFLKAI NHAEFFATQG KLVTFGIVPT QAETGYGYIC RGEAIGEDAF SVAEFVEKPD
FDTARHYVES EKYYWNSGMF LFRASSYLQE LKDLSPDIYQ ACENAVGSIN PDLDFIRIDK
EAFAMCPSDS IDYAVMEHTR HAVVVPMNAG WSDVGSWSSL WDISKKDPQR NVLHGDIFAY
NSKDNYIYSE KSFISTIGVN NLVIVQTADA LLVSDKDSVQ DVKKVVDYLK ANNRNEHKKH
LEVFRPWGKF SVIHSGDNYL VKRITVKPGA KFAAQMHLHR AEHWIVVSGT ACITKGEEIF
TISENESTFI PANTVHTLKN PATIPLELIE IQSGTYLAED DIIRLEKHSG YLE
|
|---|
| |