Gene SNSL254_A2257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2257 
Symbol 
ID6486881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2164842 
End bp2165453 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content53% 
IMG OID642737604 
Productbifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 
Protein accessionYP_002041346 
Protein GI194446190 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase
[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase 
TIGRFAM ID[TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.0689133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACAG AGCAACAACG CCGCGAGCTG GACTGGGAAA AAACCGATGG CCTGATGCCA 
GCCATCGTGC AACATGCGGT ATCCGGCGAA GTATTGATGC TGGGCTATAT GAACCCACAA
GCGCTGGACA AAACCATTGA ATCCGGCCAT GTCACGTTCT TCTCACGCAC GAAACAGCGT
TTATGGACCA AAGGCGAAAC CTCAGGCCAT GTGCTGAATG TCGTCAGCAT TGCGCCAGAT
TGCGACAACG ATACACTGCT GGTGCTGGCA AACCCTGTCG GGCCGACCTG CCACAAAGGT
ACCAGCAGCT GCTTTGGCGA CGCCAGCCAT CAGTGGTTAT TCCTGTATCA ACTGGAGCAG
CTACTGGCAG AGCGCAAAAC CGCCGATCCG ACCAGCTCTT ACACGGCGAA ACTGTACGCC
AGCGGTACCA AACGTATTGC GCAAAAAGTT GGCGAAGAAG GTGTGGAAAC CGCGCTGGCG
GCCACCGTCA ATGATCGTTT TGAATTAACC AATGAAGCGT CTGATTTGAT GTACCACCTG
CTGGTGCTGT TGCAGGATCA GGATCTCAAC CTCACCACCG TGATCGACAA TCTTCGTAAG
CGTCATCAAT AA
 
Protein sequence
MLTEQQRREL DWEKTDGLMP AIVQHAVSGE VLMLGYMNPQ ALDKTIESGH VTFFSRTKQR 
LWTKGETSGH VLNVVSIAPD CDNDTLLVLA NPVGPTCHKG TSSCFGDASH QWLFLYQLEQ
LLAERKTADP TSSYTAKLYA SGTKRIAQKV GEEGVETALA ATVNDRFELT NEASDLMYHL
LVLLQDQDLN LTTVIDNLRK RHQ