Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2252 |
Symbol | hisC |
ID | 6482338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 2160620 |
End bp | 2161699 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642737599 |
Product | histidinol-phosphate aminotransferase |
Protein accession | YP_002041341 |
Protein GI | 194444826 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.124333 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACTG AAAACACTCT CAGCGTCGCT GACTTAGCCC GTGAAAATGT CCGCAACCTG GTACCGTATC AGTCCGCCCG CCGTCTGGGC GGTAATGGCG ATGTCTGGCT GAACGCGAAT GAATTCCCGA CAGCGGTGGA GTTTCAGCTC ACCCAACAAA CGCTTAACCG CTACCCGGAA TGCCAGCCAA AGGCCGTGAT TGAAAACTAC GCGCAATATG CTGGCGTAAA GCCGGAGCAG GTGCTGGTCA GCCGCGGCGC GGATGAAGGG ATCGAACTGG TGATCCGCGC CTTCTGCGAA CCGGGGAAAG ACGCCATTCT CTACTGCCCG CCCACTTACG GTATGTACAG CGTCAGCGCC GAAACCATTG GCGTAGAGCG CCGGACGGTT CCCGCGCTTG AAAACTGGCA GCTGGATCTA CAGGGGATTT CCGACAACCT TGACGGCGCA AAAGTGGTGT TCGTTTGTAG CCCCAATAAC CCCACCGGGC AACTTATCAA CCCGCAGGAT CTACGCACGC TGCTGGAGTT GACACGCGGT AAAGCGATAG TCGTCGCCGA CGAAGCTTAT ATTGAGTTTT GCCCGCAGGC CACGCTGACA GGCTGGCTGG TTGAATATCC TCATCTGGTT ATCCTGCGCA CATTGTCGAA AGCTTTTGCG CTGGCGGGTC TGCGCTGCGG CTTTACGCTG GCTAATGAAG AGGTGATCAA CCTGCTGTTA AAAGTGATCG CCCCTTATCC GCTTTCTACG CCAGTGGCGG ATATCGCCGC CCAGGCGCTG AGCCCGCAGG GAATAAACGC AATGCGCGAT CGCGTGGCGC AGACAGTGCA GGAACGTCAG TATCTGGTGA ATGCCCTGCA ACAGACCGCC TGCGTAGAAC ACGTCTTTGA CTCTGAAACC AACTATATTC TGGCGCGGTT TACCGCCTCC AGCAGCGTGT TTAAATCCTT ATGGGATCAG GGCATTATCT TACGCGATCA GAATAAACAA CCTTCTTTAA GCGGCTGCCT GCGGATTACG GTCGGCACCC GCCAGGAAAA CCAGCGCGTC ATTGACGCCT TACGTGCGGA GCCAGTATGA
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Protein sequence | MSTENTLSVA DLARENVRNL VPYQSARRLG GNGDVWLNAN EFPTAVEFQL TQQTLNRYPE CQPKAVIENY AQYAGVKPEQ VLVSRGADEG IELVIRAFCE PGKDAILYCP PTYGMYSVSA ETIGVERRTV PALENWQLDL QGISDNLDGA KVVFVCSPNN PTGQLINPQD LRTLLELTRG KAIVVADEAY IEFCPQATLT GWLVEYPHLV ILRTLSKAFA LAGLRCGFTL ANEEVINLLL KVIAPYPLST PVADIAAQAL SPQGINAMRD RVAQTVQERQ YLVNALQQTA CVEHVFDSET NYILARFTAS SSVFKSLWDQ GIILRDQNKQ PSLSGCLRIT VGTRQENQRV IDALRAEPV
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