Gene SNSL254_A2237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2237 
Symbol 
ID6485616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp2142909 
End bp2143967 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content54% 
IMG OID642737585 
Productinner membrane protein YeeA 
Protein accessionYP_002041327 
Protein GI194442544 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.223026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGCCG ATAAGTCATT AAGCCCTTTT GAAATACGGT TGTACCGTCA TTATCGCATC 
GTGCATGGCA TACGTATCGC CCTGGCGTTC ATTCTTACCT TTCTGCTGGT TCGTCTGTTT 
TCTATTCCCG AGGGCACATG GCCGCTAATC ACGTTAGTGG TGATTATGGG GCCCATCTCA 
TTCTGGGGAA ATGTAGTGCC TCGTGCTTTT GAGCGCATAG GCGGTACGAT TCTGGGCGCG 
GCGTTAGGGC TGGTGGCGCT ACGCCTGGAG CTCTTTTCCT TACCGCTGAT GCTGGTGTGG 
TGTGCGATAG CGATGTTTTT GTGCGGCTGG CTGGCCTTAG GGAAAAAACC GTATCAGGCG 
CTACTGATAG GCATAACGCT CGCCGTTGTT GTCGGCGCTC CCGCTGGTGA TATGGATACG 
GCATTATGGC GTGGCGGGGA TGTGATTTTG GGGTCGCTAC TGGCAATGTT GTTTACCGGC 
ATCTGGCCCC AGCGCGCCTT TTTGCACTGG CGCATCCAAC TGGCTCATTG CGTCACGGCG 
TATAATCGGG TGTATCAGGC AGCGCTGTCG CCGAATTTGC TGGAGCGCCC CCGGTTGGAT 
AAACATTTGC AACGGTTGCT GAACGATGTC GTCAAAATGC GCGGGCTGAT AACGCCTGCC 
AGTAAAGAAA CCCGGATACA AAAATCTATT TTCGAGGCCA TTCAGACCAT CAACCGCAAC 
CTGGTTTGTA TGCTTGAATT ACAAATCAAT GCCCACTGGG CGACGCGCGC CAGCCATTTT 
GTGATGCTTA ACGCGCACAC ATTGCGTGAA ACCCAGCAGA TGACGCAGCA AACCTTGCTA 
ACGATCGCCC ACGCGTTGTT TGAAGGCAAC CCGCAGCCGG TACTGGCAAA CACCGGTAAA 
CTGAATGATA TTGCTGCCGA GTTGCGGCAG CTAATGAACG AGCAGCAGGG CGACGCGGTG 
GCTGAAACCC CCATCCACGG CTATGTTTGG CTAAGTATGG AAACGGCCCG ACAGTTGGAA 
CTGCTTTCAC ATTTGATCTG CCGGGCTTTG CGCAAATAA
 
Protein sequence
MRADKSLSPF EIRLYRHYRI VHGIRIALAF ILTFLLVRLF SIPEGTWPLI TLVVIMGPIS 
FWGNVVPRAF ERIGGTILGA ALGLVALRLE LFSLPLMLVW CAIAMFLCGW LALGKKPYQA 
LLIGITLAVV VGAPAGDMDT ALWRGGDVIL GSLLAMLFTG IWPQRAFLHW RIQLAHCVTA 
YNRVYQAALS PNLLERPRLD KHLQRLLNDV VKMRGLITPA SKETRIQKSI FEAIQTINRN 
LVCMLELQIN AHWATRASHF VMLNAHTLRE TQQMTQQTLL TIAHALFEGN PQPVLANTGK 
LNDIAAELRQ LMNEQQGDAV AETPIHGYVW LSMETARQLE LLSHLICRAL RK