Gene SNSL254_A2227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2227 
Symbol 
ID6484258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2133895 
End bp2134905 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content62% 
IMG OID642737575 
Producthypothetical protein 
Protein accessionYP_002041317 
Protein GI194446088 
COG category[R] General function prediction only
[S] Function unknown 
COG ID[COG2096] Uncharacterized conserved protein
[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID[TIGR00636] ATP:cob(I)alamin adenosyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTT ATACCCGAAC AGGTGACGCT GGCACCACAT CACTGTTTAC CGGCCAGCGG 
GTGAGCAAAA CCCACCCGCG GGTTGAAGCC TACGGCACGC TGGATGAGCT GAATGCCGCG
CTGAGCCTGT GCGCCTGCGC CGCTGCGGAT GAAAATCACC GCACCTTACT CGAGGCCATC
CAGCAGCAAC TTTTTTGGTT TAGCGCAGAG CTGGCCAGCG ACAGCGAGCA GCCGTCGCCC
AAACAGCGCT ACATCAGCAG CGAAGAGATT TCGGCCCTGG AAGCCGCTAT CGATCGGGCA
ATGGCCCGCG TCGAACCGCT GCACAGCTTT ATATTACCCG GACGCTGCGA AGCCGCGAGC
CGCTTACATT TTGCCCGCAC GCTGGCGCGC CGCGCCGAAC GCCGTCTGGT TGAACTGGCA
ACTGAAGTCA ACGTACGCCA GGTGCTGATG CGCTACATCA ACCGCTTATC GGACTGCCTG
TACGCCCTGG CCCGCGCGGA AGATAGCGAT GCGCACCAGG CCAACATCAT CCGTGAAGTT
AGCAAGCGCT ATCTGGCTGC CAGCCAGCCG ACCCGCAGCA AGGAGACAAC GCCCGTGGCC
CTCTCATTCC ACGATCTGCA CCAGCTCACC CGCGCCGCCG TTGAACGCGC GCAGCAACTG
CAGGTTCCGG TAGTCGTCAG CATCGTTGAC GCGCACGGCA CGGAAACTGT GACCTGGCGG
ATGCCGGACG CCCTGCTGGT CAGCAGCGAG CTGGCGCCGA AAAAGGCCTG GACCGCAGTG
GCGATGAAAA CGGCGACCCA TGAGCTGAGC GATGTCGTTC AGCCGGGCGC CGCGCTTTAC
GGTCTGGAAA GTCATTTACA GGGAAAAGTG GTCACCTTTG GCGGCGGTTA CGCCCTGTGG
CGCGGCGGCA TATTAATTGG GGGTCTTGGC ATCAGCGGCG GCAGCGTTGA GCAGGACATG
GACATAGCAC AGACCGCCAT CGCGGCTATT AACGTGGGAA CTCATCAATG A
 
Protein sequence
MAIYTRTGDA GTTSLFTGQR VSKTHPRVEA YGTLDELNAA LSLCACAAAD ENHRTLLEAI 
QQQLFWFSAE LASDSEQPSP KQRYISSEEI SALEAAIDRA MARVEPLHSF ILPGRCEAAS
RLHFARTLAR RAERRLVELA TEVNVRQVLM RYINRLSDCL YALARAEDSD AHQANIIREV
SKRYLAASQP TRSKETTPVA LSFHDLHQLT RAAVERAQQL QVPVVVSIVD AHGTETVTWR
MPDALLVSSE LAPKKAWTAV AMKTATHELS DVVQPGAALY GLESHLQGKV VTFGGGYALW
RGGILIGGLG ISGGSVEQDM DIAQTAIAAI NVGTHQ