Gene SNSL254_A2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2218 
Symbol 
ID6483198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp2128308 
End bp2128982 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content57% 
IMG OID642737566 
Productpropanediol utilization: dehydratase, medium subunit 
Protein accessionYP_002041308 
Protein GI194444956 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTA ATGAAAAATT GCTGCGCCAG ATAATTGAAG ACGTGCTTCG CGATATGAAG 
GGCAGCGATA AACCCGTCTC GTTTAATGCG CCTGCGGTAT CCACAGCACC ACAGACCGCT 
GCGCCTGCGG GCGACGGCTT TCTGACCGAA GTGGGCGAAG CGCGCCAGGG CACTCAGCAG 
GACGAAGTCA TTATCGCCGT CGGCCCGGCA TTTGGCCTAG CGCAAACCGT CAATATCGTC 
GGCTTACCGC ATAAGAGCAT TTTGCGCGAA GTCATTGCCG GTATTGAAGA AGAAGGTATC 
AGGGCGCGCG TGATTCGCTG CTTTAAATCT TCCGACGTGG CGTTCGTCGC CGTTGAAGGT 
AACCGCCTGA GCGGCTCCGG CATTTCCATC GGCATCCAGT CGAAAGGCAC TACGGTTATC 
CACCAGCAGG GACTACCGCC GCTCTCCAAC CTGGAGCTGT TCCCGCAAGC ACCGCTGCTG 
ACGCTGGAAA CCTACCGTCA GATTGGTAAA AACGCCGCCC GTTATGCGAA ACGCGAATCA 
CCGCAGCCGG TCCCTACGCT GAATGACCAG ATGGCACGCC CGAAGTACCA GGCAAAGTCG 
GCCATTTTGC ACATTAAAGA GACCAAGTAC GTCGTGACGG GCAAAAACCC GCAGGAACTG 
CGCGTGGCGC TTTGA
 
Protein sequence
MEINEKLLRQ IIEDVLRDMK GSDKPVSFNA PAVSTAPQTA APAGDGFLTE VGEARQGTQQ 
DEVIIAVGPA FGLAQTVNIV GLPHKSILRE VIAGIEEEGI RARVIRCFKS SDVAFVAVEG 
NRLSGSGISI GIQSKGTTVI HQQGLPPLSN LELFPQAPLL TLETYRQIGK NAARYAKRES 
PQPVPTLNDQ MARPKYQAKS AILHIKETKY VVTGKNPQEL RVAL