| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2175 |
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| Symbol | |
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| ID | 6482149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 2090748 |
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| End bp | 2092916 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642737525 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_002041269 |
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| Protein GI | 194442982 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2849] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.765622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.35512 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGAAAA TATTCATAAC AATTATAGTT TCATTATATT GCGCGAATAT ATGTGCAAAA
CAATCCCCCA GTACAGAATC CAAACCCGTT AATTTCATCG CCCAAATTGA AAATATCGAT
TTTAATAAAA CCGCCATTAG CAGTGACCTG AAACTTTTAC TCGCCGACCG TTATTATTTT
AAAGATAAAA CACCCTGTAA TACTAATACC CTTTCTGCGC GCGCAGAATC AATGGGACTG
ACGACAGAAG AATATATTAA TAAAATACGC AGTTTAAGAC CGGCTATTCT CGATGACCGT
TATTTTTACC TGACGGTCGA TCAGTGCGAT GCTGGCGGCA CGCCCATGCT GACTGGAATC
GAGCTATGTA CCGAAGCGCT GTGCGGTGCC GAATACATGA AAAGATCGTC TGACTTGTGG
CTGGATGATG AACTGCAACC GACGGTTAAA CGTCAGGCAA CAACAGTAGT CCATATGCCC
CTCCCCTATG ACAAAGAGAA AAAATTATGG AAAGTCACCG GCTGGTATCT GGAATCCTCA
GAAGAAACAG GGGAGGTGAT GCAGAGTAAA CAGATAGCCT TTGAAGGCTA TACCAACGAA
GAAAACTTCG CTAACCGACA ACGTGTTTCT GTATTTAAAT CTTTCTATGA AAGCGGCAAT
CTCAAAAGTA TTTATCATTA TAATGCGCAA AATAAGCGTG ACGGAAAAGC TGAAACTTAC
TTTGATGAAA AAGACAAAAT AGCGGAAACG CTGACGTTTA AAGATGGTCA ACCCGAAGGG
GAATACATCG TATACCATGA AAACGGAGCC GTTGAAAGTA AACGTTACTT TGCCCAAGGT
AAAATTAAAG ATGGCGAATG CCCACATTTT TATGATAACG GCGTTTTAAA ACAAAAACAC
AGCTATTTAA ATCAGAAACT GGAAGGCCCG GCATTTGAAT ATTTCCCTGA TGGGAAAATA
AAGGGGAAAT ATTCATACAG TAAAGGCACC ATTGTCGGCA CCAGTACGGA ATATTATTCT
ACCGGTAAAA TTCGTGGTGT TTACCACAGA AATAACCAAG GTGAAAACGA CGGAACGTTC
GAACAATACA GTGAAGAGGG CAAACTCCTT TCTAAAGCGA CCTATAAAAA TGGCAAACAG
CTTTCTGCTC AGAGCTGGTA TGAAAATGGG CATCCCAAAG AAGAATCCTC TTTTGATAGT
GAAGGCCGTA AACATGGTGC GGTCAAAGAA TGGTTCAGCA ACGGAAAGCC TGCCTCATCC
AAAATGTATA AACATGATGT GTTAGACGGG GATTTCGAAA AGTGGTACGA AAATGGTCAC
CGCGAATCAG TCTATCCCTA TAAAAACGGT ATGCTAAATG GGGACGCTAA GCACTGGAAT
GAACAGGGCA AACTCACCTA TACCACCGAA TATAAAGACG ATAAAAAGCA GGGAGCCGAT
CGCCGCTGGA GCGAACGTAC CGGTAAACTT GTTGAAGAGG TTATGTTTGC TAATGATGAA
AGAAACGGCC TGAAAAGAGA GTTTAACGAT CGTACGGGTA AGGTCTTAAG TGCGCTGCCC
TATGTCGATG GCGACAAGGA AGGTACAGAA GAAGCCTATG ATGAAGACGG CATAAAATAC
ATCCGTTGTT ACCACAACGA TGAAGAGCTT TCAGAGCTAT ATGCGCCGAC TGACGTCACC
AATAAGGCAA AGCAGGGTGA CAGCACTGCG CAATATCATT TAGGTAAGTA TGAGTTTGAA
TGCACAAACT ACGATGCGGC GATGAAATGG TTAACTCAGT CCGCAGAGCA AAATCATCCC
GGCGCGCTTC TCTTTTTGGC CTATGCGTAC AACGACGGTG ATGGCGTAGC GCAAGACAGT
AAAAAATATC TCTCCTATTT ATTCAAAGCG GCAGAGCTTG GCGAAAGTGA TGCGCAGTTA
GAAGTGGGAT ATTTAAATCT TATCGGCGAA GGAATGCCGA AAAACCTGCC GGAAGCCTAT
AAGTGGATTA AAAAATCCGC TGACCAGGGA AATGCTCAGG CGCACTATAA CCTTGGACTC
ATGTACAGGA ATGGTGATGG CGTTGAGAAA GACCTCAACA AAGCCAAACT TCATCTTACA
GCGGCGGTAA AAGGCGGCGT CAAACCTGCA CTGGCAGCCT TAAAGGAATT AACGCCTCAA
ACTAAGTAA
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| Protein sequence | MKKIFITIIV SLYCANICAK QSPSTESKPV NFIAQIENID FNKTAISSDL KLLLADRYYF
KDKTPCNTNT LSARAESMGL TTEEYINKIR SLRPAILDDR YFYLTVDQCD AGGTPMLTGI
ELCTEALCGA EYMKRSSDLW LDDELQPTVK RQATTVVHMP LPYDKEKKLW KVTGWYLESS
EETGEVMQSK QIAFEGYTNE ENFANRQRVS VFKSFYESGN LKSIYHYNAQ NKRDGKAETY
FDEKDKIAET LTFKDGQPEG EYIVYHENGA VESKRYFAQG KIKDGECPHF YDNGVLKQKH
SYLNQKLEGP AFEYFPDGKI KGKYSYSKGT IVGTSTEYYS TGKIRGVYHR NNQGENDGTF
EQYSEEGKLL SKATYKNGKQ LSAQSWYENG HPKEESSFDS EGRKHGAVKE WFSNGKPASS
KMYKHDVLDG DFEKWYENGH RESVYPYKNG MLNGDAKHWN EQGKLTYTTE YKDDKKQGAD
RRWSERTGKL VEEVMFANDE RNGLKREFND RTGKVLSALP YVDGDKEGTE EAYDEDGIKY
IRCYHNDEEL SELYAPTDVT NKAKQGDSTA QYHLGKYEFE CTNYDAAMKW LTQSAEQNHP
GALLFLAYAY NDGDGVAQDS KKYLSYLFKA AELGESDAQL EVGYLNLIGE GMPKNLPEAY
KWIKKSADQG NAQAHYNLGL MYRNGDGVEK DLNKAKLHLT AAVKGGVKPA LAALKELTPQ
TK
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