Gene SNSL254_A2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2171 
Symbol 
ID6487045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp2088708 
End bp2089232 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content58% 
IMG OID642737522 
Productputative endoprotease 
Protein accessionYP_002041266 
Protein GI194442813 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.698042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.310156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTAA CCGATACCGC TGGCGGCACG CAGACCGATC CGGGTACAGG AAAACCGTCA 
GAAAATCCAC CCGCCGCTCC ACCGTCAGAT GGTCCCGCTT CTGAAAAACC ACACGACCCA 
CCCGCCGATC CCAATAAGCC CACTCCACCG AAAGAAGAAA CGCCGCCCGG CGCGCCGGAG 
AAATACGCGT TCACCGCCCC TGAAGGTCAG GAACTCGATA CCAGCGCGCT GGCGCAGTTC 
GAACCAGTGG CGCGTGAACT GAACCTGACG CAAGAGCAGG CGCAGAAGCT GGTGGACGTC 
TATCCGAAAG TGCTGGCGGG AGTGCAACAA CAGCAAGCGG AGTCATGGCA GAAGCAAACA 
GAAGACTGGG CTGCGGCAGT TAAAGCCGAT AAAGACATTG GCGGTGACAA GCTGGCGTCT 
AATCTTGGCG CAGCTCAGCG GGCTATCGAC ACGTTCGGTA CCAAAGAACT GAAAGAGTAT 
CTCGATGGTA CCTGCGCCAG ATCTCTGGTC AATGCTGCAC CGTGA
 
Protein sequence
MALTDTAGGT QTDPGTGKPS ENPPAAPPSD GPASEKPHDP PADPNKPTPP KEETPPGAPE 
KYAFTAPEGQ ELDTSALAQF EPVARELNLT QEQAQKLVDV YPKVLAGVQQ QQAESWQKQT 
EDWAAAVKAD KDIGGDKLAS NLGAAQRAID TFGTKELKEY LDGTCARSLV NAAP