| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2156 |
|---|
| Symbol | |
|---|
| ID | 6482223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2080087 |
|---|
| End bp | 2080782 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642737510 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002041257 |
|---|
| Protein GI | 194442952 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1418] Predicted HD superfamily hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 0.148177 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCAG GATACTGGCA ATCGCAGTTT GAAGACTGGC TACGTCACCA CCACCAGGAA
CAGGATGCCG CCCATGACAT CTTCCATTTT CGTCGTGTTT GGGCAACCGC GCAAACGCTC
GGGGAAAACA GTCCTGTCGA CTGGCTGGTG GTGCTATCGG CATGTTATTT CCATGACATC
GTCAGCCTGG CGAAAAATCA TCCGCAGCGG CATCGTTCTT CCATTCTGGC GGCGGCAGAA
ACCCGGTGTA TTTTTCTGCG GGATTTTCCT GACTTTCCGG CAGAAAAACT GGCGGGCATT
TGTCATGCTA TCGAAGCGCA TAGCTTCAGC GCAAAAATTG CGCCTACCAC GCCAGAGGCA
AAAATCGTGC AGGATGCAGA CAGGCTGGAG GCGTTGGGCG CCATTGGTCT GGCGCGGGTC
TTCGCGGTTT CCGGCGCGCT GGGCGTCGCG CTGTTTGATG CCGACGATCC CTTTGCCGAC
AGACGGCCTC TTAACGATAA GCAATTCGCG CTCGACCATT TTCAAACCAA ACTGCTGAAA
CTGCCGCTGA CGATGCAGAC CGAACGGGGC AAGTCCCTGG CGCAGCGTAA TGCGGATTTT
CTGGTGTCGT ACATGGCGAA ACTGAGCGCT GAGCTGAAAG GCGACTATGA AACACGGGAT
GAGGCGGTCA TCCAGATGTT TGCTACGCAT CAGTAA
|
|---|
| Protein sequence | MDSGYWQSQF EDWLRHHHQE QDAAHDIFHF RRVWATAQTL GENSPVDWLV VLSACYFHDI
VSLAKNHPQR HRSSILAAAE TRCIFLRDFP DFPAEKLAGI CHAIEAHSFS AKIAPTTPEA
KIVQDADRLE ALGAIGLARV FAVSGALGVA LFDADDPFAD RRPLNDKQFA LDHFQTKLLK
LPLTMQTERG KSLAQRNADF LVSYMAKLSA ELKGDYETRD EAVIQMFATH Q
|
|---|
| |