| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2154 |
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| Symbol | |
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| ID | 6483958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2078132 |
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| End bp | 2078602 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642737508 |
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| Product | very short patch repair protein |
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| Protein accession | YP_002041255 |
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| Protein GI | 194445053 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
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| TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.646058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.0336526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACG TTCACGATAA AGCCACGCGC AGTAAAAATA TGCGCGCGAT AGCGACCCGC
GATACGGCGA TTGAAAAACG TCTTGCTGGC CTGTTAAGCG CGCAGGGGAT TACGTTTCAT
ACTCAGGACA CGACATTACC GGGCAAGCCG GACTTTGTGG TGAATGACTA TGATTGTGTG
ATTTTTACTC ACGGCTGCTT TTGGCATCAT CACCACTGTT ATCTGTTCAA AGTACCGGCC
ACGCGAACGG CTTTCTGGCT GGAAAAAATC GGTAAGAACG TTGAGCGCGA TGAGCGCGAT
ATTCAGCGTT TACAGGCGCT TGGCTGGCGG GTACTGATCG TCTGGGAGTG CGCCTTGCGC
GGGCGAGCGA AATTGAGCGA CGCGGCGTTG GCGGAGCGCC TGGAAGAGTG GATCTGCGGC
GGCGGCGCCA GCGCGCAGAT CGACACCCAG GGGATTCATC TACTGGCGTG A
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| Protein sequence | MADVHDKATR SKNMRAIATR DTAIEKRLAG LLSAQGITFH TQDTTLPGKP DFVVNDYDCV
IFTHGCFWHH HHCYLFKVPA TRTAFWLEKI GKNVERDERD IQRLQALGWR VLIVWECALR
GRAKLSDAAL AERLEEWICG GGASAQIDTQ GIHLLA
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