Gene SNSL254_A2137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2137 
Symbol 
ID6486032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2065989 
End bp2067212 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content61% 
IMG OID642737492 
Productflagellar hook-length control protein 
Protein accessionYP_002041239 
Protein GI194443282 
COG category[N] Cell motility 
COG ID[COG3144] Flagellar hook-length control protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.000644258 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCACCC TGCCCCAACT GATCACCACC GATACCGACA TGACCGCGGG TCTGACGTCA 
GGAAAAACCA CCGGTTCAGC CGAGGACTTT CTGGCGCTCC TGGCGGGCGC GTTAGGCGCA
GACGGCGCAC AGGGCAAAGA CGCCCGCATC ACGCTGGCCG ATTTACAGGC GGCAGGCGGC
AAGTTATCGA AAGAGCTACT GACCCAACAT GGCGAGCCGG GCCAGGCGGT GAAGCTTGCC
GACCTGCTGG CGCAAAAAGC GAATGCGACG GATGAAACGC TTACCGATCT GACACAAGCG
CAGCATCTAC TGTCTACGCT AACGCCATCG TTGAAAACCA GCGCTCTGGC CGCATTGAGT
AAAACGGCGC AGCATGATGA GAAAACGCCC GCGCTGAGCG ATGAGGATCT TGCCAGTCTG
AGCGCCTTAT TCGCCATGCT GCCCGGACAA CCTGTCGCGA CGCCTGTCGC CGGAGAGACG
CCGGCTGAAA ATCACATCGC CTTGCCGTCA CTGTTGCGCG GCGACATGCC ATCGGCGCCG
CAGGAAGAGA CACATACGCT CTCTTTTAGC GAGCATGAAA AAGGGAAAAC CGAGGCATCG
CTTGCGCGCG CCAGCGACGA TCGCGCCACG GGTCCAACAC TGACGCCGCT GGTGGTCGCT
GCCGCCGTGA CCAGCGCGAA AGTGGAGGTG GATAACCCGC CCGCGCCAGT AACGCATGGC
GCGGCAATGC CGACGCTCAG CAGCGCCACG GCGCAACCGC AACCGCTACC TGTCGCCTCA
GCCCCGGTAC TCAGCGCGCC GTTAGGCAGC CATGAATGGC AGCAAACGTT CAGTCAGCAG
GTCATGTTAT TTACGCGTCA GGGACAGCAA AGCGCGCAGC TTCGATTGCA TCCGGAAGAG
TTAGGTCAGG TGCATATTTC GCTCAAGCTG GATGACAATC AGGCGCAGCT CCAGATGGTA
TCGCCGCACA GCCATGTCCG CGCCGCGCTG GAAGCCGCCC TGCCCATGTT GCGCACTCAG
TTGGCGGAAA GCGGCATCCA GTTGGGACAA AGCAGCATCA GTAGCGAAAG CTTTGCCGGA
CAGCAGCAGT CTTCATCGCA ACAACAGTCT TCCCGCGCCC AACACACGGA CGCGTTTGGC
GCTGAAGATG ACATAGCGTT AGCGGCGCCG GCCTCGCTTC AGGCCGCCGC GCGCGGCAAT
GGCGCAGTGG ATATCTTCGC CTAA
 
Protein sequence
MITLPQLITT DTDMTAGLTS GKTTGSAEDF LALLAGALGA DGAQGKDARI TLADLQAAGG 
KLSKELLTQH GEPGQAVKLA DLLAQKANAT DETLTDLTQA QHLLSTLTPS LKTSALAALS
KTAQHDEKTP ALSDEDLASL SALFAMLPGQ PVATPVAGET PAENHIALPS LLRGDMPSAP
QEETHTLSFS EHEKGKTEAS LARASDDRAT GPTLTPLVVA AAVTSAKVEV DNPPAPVTHG
AAMPTLSSAT AQPQPLPVAS APVLSAPLGS HEWQQTFSQQ VMLFTRQGQQ SAQLRLHPEE
LGQVHISLKL DDNQAQLQMV SPHSHVRAAL EAALPMLRTQ LAESGIQLGQ SSISSESFAG
QQQSSSQQQS SRAQHTDAFG AEDDIALAAP ASLQAAARGN GAVDIFA