Gene SNSL254_A2134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2134 
SymbolfliH 
ID6484798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2063450 
End bp2064157 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content61% 
IMG OID642737489 
Productflagellar assembly protein H 
Protein accessionYP_002041236 
Protein GI194445015 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0000271327 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTAATG AATTGCCGTG GCAAGTCTGG ACCCCCGACG ATCTCGCCCC GCCGCCGGAG 
ACGTTTGTGC CGGTTGAGGC TGATAACGTG ACCTTGACAG ACGATACGCC GGAGCCCGAA
CTCACTGCCG AACAGCAGCT GGAGCAGGAG CTGGCGCAGC TAAAAATACA GGCCCATGAA
CAAGGTTATA ACGCCGGGCT GGCGGAGGGA CGGCAAAAAG GACACGCGCA GGGATACCAG
GAAGGGTTAG CGCAGGGGCT GGAGCAAGGA CAAGCCCAGG CGCAGACGCA GCAGGCGCCG
ATTCATGCCC GTATGCAGCA GTTAGTGAGC GAGTTTCAGA ACACGCTTGA CGCGCTCGAT
AGCGTTATCG CCTCACGGCT GATGCAAATG GCCCTGGAGG CTGCGCGTCA GGTCATCGGC
CAAACGCCGG CGGTGGACAA CTCGGCGCTG ATTAAACAGA TCCAACAACT GTTGCAGCAA
GAGCCGCTCT TTAGCGGCAA GCCGCAGTTG CGCGTGCATC CGGACGACTT ACAGCGGGTG
GAAGAGATGC TGGGCGCCAC GCTCAGTCTT CACGGATGGC GGTTACGCGG CGATCCAACG
TTGCATCACG GCGGGTGTAA AGTCTCTGCC GATGAGGGCG ATCTGGACGC CAGCGTCGCT
ACTCGCTGGC AAGAGTTGTG TCGCCTGGCG GCGCCGGGAG TGCTCTGA
 
Protein sequence
MSNELPWQVW TPDDLAPPPE TFVPVEADNV TLTDDTPEPE LTAEQQLEQE LAQLKIQAHE 
QGYNAGLAEG RQKGHAQGYQ EGLAQGLEQG QAQAQTQQAP IHARMQQLVS EFQNTLDALD
SVIASRLMQM ALEAARQVIG QTPAVDNSAL IKQIQQLLQQ EPLFSGKPQL RVHPDDLQRV
EEMLGATLSL HGWRLRGDPT LHHGGCKVSA DEGDLDASVA TRWQELCRLA APGVL