Gene SNSL254_A2130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2130 
SymbolfliE 
ID6483349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2060256 
End bp2060570 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content55% 
IMG OID642737485 
Productflagellar hook-basal body protein FliE 
Protein accessionYP_002041232 
Protein GI194445746 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0000214778 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGCAA TACAGGGGAT TGAAGGGGTT ATTAGCCAGT TACAGGCGAC GGCGATGGCC 
GCAAGCGGGC AAGAAACACA CTCGCAGTCG ACGGTGAGTT TTGCCGGCCA GCTACATGCT
GCGCTGGATC GTATTAGCGA CAGACAAACG GCGGCGCGCG TTCAGGCGGA AAAATTCACT
CTGGGTGAGC CGGGCATTGC GCTTAATGAC GTGATGGCTG ATATGCAAAA AGCGTCCGTC
TCTATGCAAA TGGGGATTCA GGTGCGCAAT AAGCTGGTCG CCGCGTATCA GGAAGTCATG
TCCATGCAGG TTTAA
 
Protein sequence
MAAIQGIEGV ISQLQATAMA ASGQETHSQS TVSFAGQLHA ALDRISDRQT AARVQAEKFT 
LGEPGIALND VMADMQKASV SMQMGIQVRN KLVAAYQEVM SMQV