| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2125 |
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| Symbol | |
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| ID | 6484051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 2055927 |
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| End bp | 2057411 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642737480 |
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| Product | cytoplasmic alpha-amylase |
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| Protein accession | YP_002041227 |
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| Protein GI | 194444955 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.172028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0000021601 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAACC CCACGTTATT GCAGTACTTC CACTGGTATT ATCCCGACGG CGGTAAACTC
TGGTCTGAGC TGGCGGAACG TGCTGATGGG CTGAATGATA TCGGTATCAA TATGGTCTGG
CTACCGCCCG CCTGTAAAGG CGCCTCCGGC GGCTATTCCG TAGGCTATGA TAGCTACGAC
CTGTTTGACC TCGGCGAATT TGACCAAAAA GGAACTATCG CGACAAAGTA CGGCGATAAA
CGCCAGTTAC TGACGGCGAT AGACGCGCTC AAAAAAAATA ATATTGCGGT GCTGCTCGAC
GTCGTCGTGA ACCACAAAAT GGGCGCAGAC GAAAAAGAAC GTATCCGCGT TCAGCGCGTG
AATCAGGATG ACCGCACGCA AATCGATGAC AACATCATTG AATGCGAAGG CTGGACGCGC
TACACCTTCC CTGCCCGCGC GGGCCAGTAT TCCAACTTTA TTTGGGACTA TCACTGTTTC
AGCGGCATTG ATCACATCGA GAATCCCGAC GAAGACGGCA TTTTTAAGAT CGTCAATGAC
TATACCGGCG ATGGCTGGAA CGATCAGGTT GATGATGAGC TGGGTAATTT CGACTATCTG
ATGGGGGAAA ATATCGATTT TCGCAATCAC GCGGTTACGG AAGAGATTAA ATATTGGGCT
CGTTGGGTCA TGGAACAAAC CCACTGTGAC GGCTTTCGCC TGGACGCGGT AAAACATATA
CCCGCCTGGT TTTATAAAGA ATGGATTGAG CATGTACAGG CGGTTGCGCC AAAACCGCTG
TTTATTGTCG CAGAATACTG GTCGCATGAA GTGGATAAAC TGCAAACGTA CATCGATCAG
GTCGACGGGA AAACCATGCT GTTCGACGCG CCGTTGCAGA TGAAATTTCA CGAGGCCTCG
CGCCAGGGCG CGGAGTATGA CATGCGCCAC ATATTCACCG GCACTCTGGT AGAAGCCGAC
CCTTTTCATG CGGTGACGCT GGTCGCTAAC CACGATACAC AACCGTTACA GGCGCTGGAA
GCGCCGGTAG AACCCTGGTT CAAACCATTG GCCTATGCGC TGATCCTGCT TCGTGAAAAC
GGCGTACCGT CAGTGTTTTA TCCCGATTTA TACGGCGCCA GCTATGAAGA TAGCGGCGAA
AATGGCGAGA CCTGTCGGGT CGACATGCCG GTGATTAACC AACTGGATCG GCTGATCCTC
GCTCGTCAGC GTTTTGCGCA CGGTATACAA ACACTCTTTT TCGATCATCC TAACTGTATC
GCCTTTAGTC GCAGCGGTAC TGAAGAGAAT CCAGGCTGTG TGGTTGTACT TTCCAATGGC
GACGACGGTG AAAAAACCCT CCTGCTCGGC GACAATTACG CTAACAAGAC CTGGCGTGAT
TTTCTGGGAA ACCGCAGTGA GCATGTTGTA ACTAATGATC AAGGCGAAGC GACGTTCTTC
TGCAACGCAG GCAGCGTCAG CGTGTGGGTC ATTGAGGACG TGTGA
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| Protein sequence | MKNPTLLQYF HWYYPDGGKL WSELAERADG LNDIGINMVW LPPACKGASG GYSVGYDSYD
LFDLGEFDQK GTIATKYGDK RQLLTAIDAL KKNNIAVLLD VVVNHKMGAD EKERIRVQRV
NQDDRTQIDD NIIECEGWTR YTFPARAGQY SNFIWDYHCF SGIDHIENPD EDGIFKIVND
YTGDGWNDQV DDELGNFDYL MGENIDFRNH AVTEEIKYWA RWVMEQTHCD GFRLDAVKHI
PAWFYKEWIE HVQAVAPKPL FIVAEYWSHE VDKLQTYIDQ VDGKTMLFDA PLQMKFHEAS
RQGAEYDMRH IFTGTLVEAD PFHAVTLVAN HDTQPLQALE APVEPWFKPL AYALILLREN
GVPSVFYPDL YGASYEDSGE NGETCRVDMP VINQLDRLIL ARQRFAHGIQ TLFFDHPNCI
AFSRSGTEEN PGCVVVLSNG DDGEKTLLLG DNYANKTWRD FLGNRSEHVV TNDQGEATFF
CNAGSVSVWV IEDV
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