Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2116 |
Symbol | fliY |
ID | 6485942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2048140 |
End bp | 2048940 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642737472 |
Product | cystine transporter subunit |
Protein accession | YP_002041219 |
Protein GI | 194444067 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0000000000583389 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAATTAG CACTGCTGGG ACGTCAGGCA CTGATGGGAG TAATGGCTGT AGCGCTGGTG GCGGGAATGA GCGCGAAGAG CTTTGCCGAT GAGGGTTTGC TGAACAAAGT TAAAGAACGC GGCACGCTGC TGGTAGGGCT GGAAGGTACC TATCCGCCGT TTAGCTTTCA GGGCGACGAC GGCAAATTAA CCGGTTTTGA AGTCGATTTC GCCGAGGCGT TGGCAAAACA TCTGGGCGTT AAAGCGTCGT TGAAGCCGAC CAAATGGGAC GGAATGCTGG CGTCACTGGA CTCTAAACGC ATTGATGTGG TGATAAACCA GGTCACGATT TCAGACGTCC GCAAGAAAAA ATATGACTTC TCTACGCCTT ATACTGTCTC CGGCGTTCAG GCGCTGGTGA AAAAAGGCAA TGAAGGCACG ATCAAAACGG CTGCCGATCT GCAGGGCAAA AAAGTCGGCG TTGGGCTGGG GACTAACTAT GAAGAGTGGC TACGTCAACA TGTGCAGGGC GTGGATATCC GTACCTATGA CGATGATCCT ACAAAATACC AGGATCTGCG CGTAGGCCGT ATTGACGCGA TTTTAGTCGA TCGTCTGGCG GCGCTGGATC TGGTGAAAAA AACCAAAGGT ACGCTGGCCG TCACCGGTGA TGCGTTTTCG CGTCAGGAGT CCGGCGTTGC GTTACGTAAA GGCAACGAAG ACTTGCTGAA GGCGGTAGAT AACGCCATTG CGGAAATGCA AAAAGATGGC ACCTTAAAAG CGCTCTCTGA AAAATGGTTT GGCGCTGACG TGACCCAATA A
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Protein sequence | MKLALLGRQA LMGVMAVALV AGMSAKSFAD EGLLNKVKER GTLLVGLEGT YPPFSFQGDD GKLTGFEVDF AEALAKHLGV KASLKPTKWD GMLASLDSKR IDVVINQVTI SDVRKKKYDF STPYTVSGVQ ALVKKGNEGT IKTAADLQGK KVGVGLGTNY EEWLRQHVQG VDIRTYDDDP TKYQDLRVGR IDAILVDRLA ALDLVKKTKG TLAVTGDAFS RQESGVALRK GNEDLLKAVD NAIAEMQKDG TLKALSEKWF GADVTQ
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