Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2115 |
Symbol | |
ID | 6486467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2047000 |
End bp | 2047986 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642737471 |
Product | D-cysteine desulfhydrase |
Protein accession | YP_002041218 |
Protein GI | 194445885 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
TIGRFAM ID | [TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00000000000146031 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCACTAC ATCACTTAAC GCGCTTTCCT CGCCTGGAGC TTATCGGCGC GCCGACCCCG CTCGAATACC TGCCGCGATT GTCTGATTAT CTTGGCCGTG AGATTTACAT TAAGCGCGAT GACGTTACGC CCATTGCAAT GGGCGGCAAT AAACTGCGCA AGCTGGAGTT TTTGGTGGCC GACGCGCTGC GAGAAGGGGC GGATACGCTG ATAACCGCAG GAGCGATTCA GTCGAACCAT GTCCGTCAGA CGGCGGCGGT CGCGGCCAAA TTGGGACTGC ATTGCGTCGC CTTGCTGGAA AATCCAATCG GTACCACCGC GGAAAATTAC CTGACGAATG GTAATCGCCT GTTACTGGAT TTATTTAATA CGCAAATTGA GATGTGCGAT GCGCTAACCG ATCCGGATGC GCAGCTGCAA ACGCTGGCGA CGCGCATTGA AGCGCAAGGG TTCAGGCCCT ATGTGATTCC GGTCGGCGGC TCCAGCGCGC TGGGGGCAAT GGGATACGTA GAGAGCGCCC TGGAAATCGC CCAGCAGTGT GAAGAGGTCG TCGGGCTCTC TTCGGTGGTG GTGGCCTCCG GCAGCGCCGG AACGCACGCC GGGTTAGCTG TCGGGCTGGA ACATCTGATG CCGGATGTCG AACTAATTGG CGTGACCGTT TCACGTTCTG TCGCCGAGCA GAAACCCAAA GTGATTGCCT TGCAGCAGGC TATTGCCGGT CAGCTGGCGC TGACGGCGAC GGCGGATATT CATTTATGGG ATGACTATTT TGCCCCGGGT TACGGCGTGC CAAATGACGC GGGGATGGAG GCGGTGAAAC TGCTGGCGAG CCTGGAGGGG GTGTTGCTGG ATCCGGTATA TACCGGAAAA GCGATGGCGG GTCTGATAGA CGGCATCAGC CAGAAACGCT TTAACGATGA CGGGCCGATT CTCTTTATTC ACACCGGTGG GGCGCCTGCG CTGTTTGCCT ACCATCCTCA TGTATAA
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Protein sequence | MPLHHLTRFP RLELIGAPTP LEYLPRLSDY LGREIYIKRD DVTPIAMGGN KLRKLEFLVA DALREGADTL ITAGAIQSNH VRQTAAVAAK LGLHCVALLE NPIGTTAENY LTNGNRLLLD LFNTQIEMCD ALTDPDAQLQ TLATRIEAQG FRPYVIPVGG SSALGAMGYV ESALEIAQQC EEVVGLSSVV VASGSAGTHA GLAVGLEHLM PDVELIGVTV SRSVAEQKPK VIALQQAIAG QLALTATADI HLWDDYFAPG YGVPNDAGME AVKLLASLEG VLLDPVYTGK AMAGLIDGIS QKRFNDDGPI LFIHTGGAPA LFAYHPHV
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