Gene SNSL254_A2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2100 
Symbol 
ID6484754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2036632 
End bp2037297 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content53% 
IMG OID642737456 
Producthypothetical protein 
Protein accessionYP_002041206 
Protein GI194446082 
COG category[R] General function prediction only 
COG ID[COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA 
TIGRFAM ID[TIGR02292] yecA family protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value2.45396e-18 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATGG AACCATTAAA CGAGAACGAG CTGGAATGGC TGGATGATGT GCTGACGAAA 
TACAATACCG ATCAGGCCAT TTTGGATGTC GCGGAGCTAG ACGGTCTGAT TACTGCGGTA
CTAAGTTCTC CGCGTCCCAT CGAGCCGGAA CAGTGGCTGG TCGCGATATG GGGGGGACCC
GCGTACGTAC CGCGCTGGAC ATCTGAAAAA GAAATGACGC GATTTATGGA TCTGGTGTTC
CAGCACATGG CGGACACAGC CGCCCGGCTT GAAGACTATC CAGAACAGTT CGAGCCGCTG
TTTGGCCTGC GAGAAGTTGA TGGCCATGAA TTAACGATTG TTGAAGAATG GTGCTTTGGT
TACATGCGCG GAGTGTCGCT GTCCGACTGG TCTGACTTGC CGGATACGCT AAAACCGGCG
CTGGAAGCGA TTGCCTTACA CGGCACTGAA GAAAACTTTG CGCTGTTGGA TAAAATGAGC
CCGGAAGCGT TCGATAAAAG CGTTGACGCT ATCCGTATCG CGGCGCTTGA GCTGCATGCC
TGGTGGATGG CGCATCCGCA CACGACGCCG CTACAGATGC CGATAAAAGC AGAGGTGAAA
GTGGGGCGTA ACGATCCTTG TCCATGCGGG AGCGGCAAAA AATTTAAGCA GTGCTGCCTG
CATTAA
 
Protein sequence
MKMEPLNENE LEWLDDVLTK YNTDQAILDV AELDGLITAV LSSPRPIEPE QWLVAIWGGP 
AYVPRWTSEK EMTRFMDLVF QHMADTAARL EDYPEQFEPL FGLREVDGHE LTIVEEWCFG
YMRGVSLSDW SDLPDTLKPA LEAIALHGTE ENFALLDKMS PEAFDKSVDA IRIAALELHA
WWMAHPHTTP LQMPIKAEVK VGRNDPCPCG SGKKFKQCCL H