Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2094 |
Symbol | |
ID | 6483821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2032868 |
End bp | 2033506 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642737450 |
Product | hypothetical protein |
Protein accession | YP_002041200 |
Protein GI | 194443292 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.969771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 5.6242699999999994e-21 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATTG CACTGATGAT GGAAAATAGC CAGGCCAGCA AAAATGCCAT CATTTATAAC GAACTTAGCG CCGTCGCCAA TGAAAAGGGA TTTCCCGTTT TTAACGTCGG CATGTGCGAC GAAAATGACC ATCACCTGAC GTACATTCAT TTAGGCATCA TGGCGAGTAT TCTGCTTAAT GCAAACGCGG TTGATTTTGT GGTTACTGGC TGTGGCACTG GTCAGGGCGC GCTGATGTCG TTAAATATTC ATCCAGGTGT CATTTGTGGC TATTGCATCG ATCCGGCAGA TGCTTTTCTG TTTGCGCAGA TCAACAACGG CAATGCGTTG TCCCTGCCAT TTGCGAAAGG CTTTGGCTGG GGCGCTGAGC TGAACGTGCG TTTCATCTTT GAAAAAGCGT TTACCGGGCG TAAAGGCGAG GGGTATCCGC CTGAGCGCAA AGCGCCGCAG GTACGCAATG CGGGCATTTT GAACCAGGTT AAGGCCGCGG TCGTCAAAGA GAATTATCTG GATACACTAC GGGCTATCGA TCCTGAACTG GTTAAAACGG CGGTTTCAGG GCCGCGTTTC CAGCAATGTT TGTTTGAAAA CGGCCAGAAT AAAGAAATAG AAGCGTTTGT ACGTGAGATG CTGGGGTAA
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Protein sequence | MKIALMMENS QASKNAIIYN ELSAVANEKG FPVFNVGMCD ENDHHLTYIH LGIMASILLN ANAVDFVVTG CGTGQGALMS LNIHPGVICG YCIDPADAFL FAQINNGNAL SLPFAKGFGW GAELNVRFIF EKAFTGRKGE GYPPERKAPQ VRNAGILNQV KAAVVKENYL DTLRAIDPEL VKTAVSGPRF QQCLFENGQN KEIEAFVREM LG
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