| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2091 |
|---|
| Symbol | |
|---|
| ID | 6485822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2031081 |
|---|
| End bp | 2031623 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642737447 |
|---|
| Product | ThiJ/PfpI domain protein |
|---|
| Protein accession | YP_002041197 |
|---|
| Protein GI | 194445362 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.616699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 3.51942e-22 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCTGTTGG CGCCAGGATT TGAAGAAGCA GAGGCCATTG TTACTCTTGA TATTCTGCGA
CGTTTGCATA TCGACGTCGA AACGCTGGCG TGTGCTGAAT CACGGGCGGT GGTGAGTTAC
CATGATATTC CTATGGTTGC GGACAGCACG CTGAGTGAAC GCCAGCAGGC GCTTTTTGAT
GCGGTAGTGC TGCCGGGCGG TCCGCAGGGG AGCGCTAATC TGGCGGCTAA TCCGGCGGTG
ATCGCTTTCG TTGCGCGTCA TGATGCGGCA GGCAAATTTA TTTGTCCTAT CTGTTCCGCG
GCGGCAAGGG TGCTGGGTGC TCACGGATTG CTGAAGGGGC GTCGTTATGT CTGTTCCGGC
GACCTGTGGA AAGCGGTTCC GGAAGGTGTC TATGTGGATG CGCCCGTTGT TGAAGATGGT
AATTTAATTA GCGGCAAAGG CTTGGGTCAT GTCTTTGATT TCGCGCTAAC CCTTTCCGCC
AGACTGCTGG GAGACGATGC GCCGGTTCGC GAACAGGCTG AACATATCTA TTATCCCTGG
TAA
|
|---|
| Protein sequence | MLLAPGFEEA EAIVTLDILR RLHIDVETLA CAESRAVVSY HDIPMVADST LSERQQALFD
AVVLPGGPQG SANLAANPAV IAFVARHDAA GKFICPICSA AARVLGAHGL LKGRRYVCSG
DLWKAVPEGV YVDAPVVEDG NLISGKGLGH VFDFALTLSA RLLGDDAPVR EQAEHIYYPW
|
|---|
| |