Gene SNSL254_A2064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2064 
Symbol 
ID6484843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2004020 
End bp2004763 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content53% 
IMG OID642737420 
Productputative methyltransferase 
Protein accessionYP_002041170 
Protein GI194446780 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID[TIGR00740] methyltransferase, putative 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.00535454 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTCACC GTGACACGCT TTTTTCTGCG CCTATCGCCC GTCTCGGCGA CTGGACTTTT 
GATGAACGAG TAGCCGAAGT TTTCCCCGAC ATGATTCAGC GTTCGGTACC AGGCTACTCC
AACATCATCT CCATGATTGG CATGTTGGCT GAACGCTTTG TGCAGCCGAA CACGCAGGTC
TACGATCTGG GCTGCTCGCT GGGCGCCGCG ACGCTGTCTG TTCGGCGTAA TATCCGCCAT
GAGCATTGTC GCATTATCGC CGTCGATAAC TCCCCGGCCA TGATTGAACG CTGCCGCCGT
CATATTGATG CGTATAAAGC GCCTACGCCG GTTGAAGTCG TTGAAGGCGA TATCCGCGAT
ATCACTATTG AAAACGCCTC GATGGTGGTG CTGAATTTTA CCCTGCAATT CCTTGAACCT
GCCGAACGCC AGGCATTGCT GGATAAGATT TACCTGGGGT TGAATCCCGG CGGCGCGCTG
GTACTGTCGG AAAAATTTAG CTTTGAAGAC GCGAAAGTGG GCGAGCTGTT ATTCAACATG
CACCACGATT TTAAACGCGC GAATGGGTAC AGCGAACTGG AGATCAGCCA GAAACGCAGT
ATGCTGGAAA ACGTGATGCT CACCGACTCG GTGGAAACAC ATAAAGCGCG CCTGCGTAAG
GCGGGTTTCG AACACAGTGA ACTGTGGTTC CAGTGCTTTA ATTTCGGGTC GCTTGTCGCG
TTAAAAGCCG GAGTTGCCGC ATGA
 
Protein sequence
MSHRDTLFSA PIARLGDWTF DERVAEVFPD MIQRSVPGYS NIISMIGMLA ERFVQPNTQV 
YDLGCSLGAA TLSVRRNIRH EHCRIIAVDN SPAMIERCRR HIDAYKAPTP VEVVEGDIRD
ITIENASMVV LNFTLQFLEP AERQALLDKI YLGLNPGGAL VLSEKFSFED AKVGELLFNM
HHDFKRANGY SELEISQKRS MLENVMLTDS VETHKARLRK AGFEHSELWF QCFNFGSLVA
LKAGVAA