Gene SNSL254_A2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2062 
Symbol 
ID6486191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp2002713 
End bp2003531 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content56% 
IMG OID642737418 
Producthypothetical protein 
Protein accessionYP_002041168 
Protein GI194442859 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.00540989 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCTACA TTGGCCTGCC GCAATGGTCG CACCCGAAAT GGGCGCGGCT CGGCATCACC 
AGTCTGGAAG AGTATGCCCG CCACTTTAAT TGCGTAGAGG GCAACACCAC GCTTTACGCG 
CTGCCGAAAG CGGAAATTGT CGATCGCTGG TATGCGCAAA CTACGGACGA TTTCCGTTTT 
TGCTTTAAAT TTCCCGCCAC CATTTCTCAC CAGGCCGCGC TGCGCCATTG CGACGATCTG 
GTACAGGCGT TTTTTACCCG CCTGGCGCCG CTGGAAACGC GTATTGGCCA ATACTGGCTG 
CAGTTGCCCG CCGCCTTTGG ACCGCGCGAT CTCCCCGCCT TATGGCAGTT TCTTGATGCG 
CTCCCCGCCA CGTTTACCTA TGGCGTAGAA GTTCGTCATC CGTGTTTTTT TGACAAGGGT 
GAGGATGAAC AGCGGCTCAA TCGCGGGTTA CACGCGCGCG GCGTAAACCG CGTGATCCTG 
GATAGTCGTC CGGTACATGC CGCCCATCCC CACAGCGAGG CCGTCCGCGA CGCACAGCGA 
AAAAAACCCA AAGTCCCGGT ACATGCGGTC GTGACGGCCA GCCATCCGAT GGTGCGTTTT 
ATCGGTAGCG ACAATATGGC GCAAAACCGT GAATTTTTCG CCGCCTGGTT GCAGAAACTC 
CCGCAGTGGC GGCAGACCAC CACGCCTTTT CTGTTTTTAC ATACTCCGGA TATCGCGCAG 
GCGCCGGAAC TGGTGAATAC ACTTTGGCAT GATTTACGCA GCGTCTTACC GGAAATCGGC 
ACTGCTCCGT CCATTCCACA GCAATCTTCT CTTTTCTGA
 
Protein sequence
MIYIGLPQWS HPKWARLGIT SLEEYARHFN CVEGNTTLYA LPKAEIVDRW YAQTTDDFRF 
CFKFPATISH QAALRHCDDL VQAFFTRLAP LETRIGQYWL QLPAAFGPRD LPALWQFLDA 
LPATFTYGVE VRHPCFFDKG EDEQRLNRGL HARGVNRVIL DSRPVHAAHP HSEAVRDAQR 
KKPKVPVHAV VTASHPMVRF IGSDNMAQNR EFFAAWLQKL PQWRQTTTPF LFLHTPDIAQ 
APELVNTLWH DLRSVLPEIG TAPSIPQQSS LF