Gene SNSL254_A2061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2061 
Symbol 
ID6482922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2002150 
End bp2002716 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content56% 
IMG OID642737417 
Producthypothetical protein 
Protein accessionYP_002041167 
Protein GI194446128 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.00956218 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGAAAC TCAACGCGAC CACAACCGCC CTGGTGGTTA TTGATTTACA GGAAGGAATT 
CTTCCGTTTG CCGGCGGCCC GTATACGGCA AATGAGGTGG TCGCCCGCGC CGCGCGGCTG
GCGGAAAAGT GTCGTGCCAA CGGCTCGCCC GTGGTTATGG TACGCGTTGG ATGGTCTGAT
GATTATGCCG AAGCGTTAAA ACAGCCGGTG GATGCCGCAA CGCCTGCGCA CGCGTTGCCG
GAAAACTGGT GGACCTGGCC TACGGCATTG GGTAAAAAGG ACAGCGATCT GGAAGTGACT
AAACGCCAGT GGGGCGCGTT TTACGGCACC GACCTGGAAT TACAACTTCG CCGCCGGGGT
ATCGACACCA TCATATTGTG CGGAATCTCA ACCAATATCG GCGTCGAATC CACAGCGCGT
AACGCCTGGG AGTTAGGATT TAACCTTATT ATTGCCGAAG ATGCCTGTAG CGCCGCCAGC
AGTGAGCAGC ATCAGAGCAG TATGACGCAT ATTTTCCCGC GCATTGGCCG GGTACGCAGC
GTAGAGGATA TTTTAAACGC CTTATGA
 
Protein sequence
MLKLNATTTA LVVIDLQEGI LPFAGGPYTA NEVVARAARL AEKCRANGSP VVMVRVGWSD 
DYAEALKQPV DAATPAHALP ENWWTWPTAL GKKDSDLEVT KRQWGAFYGT DLELQLRRRG
IDTIILCGIS TNIGVESTAR NAWELGFNLI IAEDACSAAS SEQHQSSMTH IFPRIGRVRS
VEDILNAL