Gene SNSL254_A2033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2033 
Symbol 
ID6486234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1974287 
End bp1975162 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content53% 
IMG OID642737389 
Productcopper resistance protein D 
Protein accessionYP_002041139 
Protein GI194445516 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1276] Putative copper export protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.18455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGA CATTCGTCTG GATAACTCTC CGATTTATTC ATTTTGCTAG TTTGATGCTG 
GTCTACGGCT GCGCGCTTTA CGGCGCCTGG CTGGCACCCG CACCAATTCG TCGTTTAATG
ACGCGTCGAT TTTTACATCT GCAACGACAT GCCGCCGCCT GGAGCGTTAT CAGCGCGGCT
TTTATGCTGG CGATTCAGGG CGGGCTGATG GGCGGCGGCT GGCCCGATGT TTTTTCCGTC
TCGGTGTGGG GCGCGGTACT GCAAACCCGC TTTGGCGCGG TCTGGATATG GCAAATTATC
CTCGCGCTGG TCACGCTGGC GGTGGTAGTC ATTGCGCCGG TAAAAATGCA ACGACGGCTT
CTTATTCTAA CCGTTGCTCA GTTTATCCTG CTGGCAGGCG TTGGACATGC GACGATGCGC
GATGGTGTAG CGGGAACATT ACAGCAAATT AACCATGCTC TGCATTTGCT CTGTGCCGCA
GCCTGGTTTG GCGGGCTGTT GCCAGTGGTT TATTGTATGC GCATGGCTCA AGGACGCTGG
CGTCAACATG CCATTAGCGC CATGATGCGT TTTTCTCGTT ATGGTCACTT TTTTGTGGCG
GGCATACTGC TCACAGGCAT TGGCAACACG CTATTTATCA CGGGATTTAC CGCTATCTGG
CAGACCACCT ATGGACAGTT GCTTTTGTTA AAATGTGCGC TGGTGGTGCT TATGGTAGCA
ATTGCGCTGA CGAATCGGTA TGTTCTCGTA CCACGTATGC GACAGGAAAA TCCCCGGACT
GACCTATGGT TTGTCAGGAT GACGCAAATT GAATGGGGAG TTGGAGGCAT AGTTCTGGCG
ATCGTCAGCC TGTTTGCAAC CCTCGAACCT TTCTGA
 
Protein sequence
MMLTFVWITL RFIHFASLML VYGCALYGAW LAPAPIRRLM TRRFLHLQRH AAAWSVISAA 
FMLAIQGGLM GGGWPDVFSV SVWGAVLQTR FGAVWIWQII LALVTLAVVV IAPVKMQRRL
LILTVAQFIL LAGVGHATMR DGVAGTLQQI NHALHLLCAA AWFGGLLPVV YCMRMAQGRW
RQHAISAMMR FSRYGHFFVA GILLTGIGNT LFITGFTAIW QTTYGQLLLL KCALVVLMVA
IALTNRYVLV PRMRQENPRT DLWFVRMTQI EWGVGGIVLA IVSLFATLEP F