Gene SNSL254_A2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2028 
Symbol 
ID6482648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1971521 
End bp1972468 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content52% 
IMG OID642737386 
Productexodeoxyribonuclease 8 
Protein accessionYP_002041136 
Protein GI194444310 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.732924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.0551147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACAGG ACACAACTGA ACATCATCCG GACCCACAGC CGCTGGAGAA TGAACCACCT 
GTAAGCCAGA CAGAAGCAGG CTACCAGAAA ATACGGGCAG AACTGCACGA AGCACGTAAA 
AACATTCCAC CCAAAAACCC GGTTGATGTT GGTAAACAAC TGGCAGCCGC GCGCGGTGAA 
TATGTCGAAG ACATCAGCGA CCCGAACGAT CCGAGGTGGG TTCATAACAA TTACAGCGCC 
TCAAATCAGG GTGAAAAAGA AGAAGTGGTG CCGGAGGGAA AACAACCAGC AGCAGAGCCG 
GAGGCTGTCA CCAGAAACGC GGACGGGACT TTCGATGTAT CAGCGCTATT CCCGCCCCCC 
TCAAACCAGA CCGAAAAAAC GGAAGCCAGA ACAGAAAGAG ATGGAGAAAC GCCGAAAGAG 
AGCAACCAGC AGGAAACGGC TGGCGATACA GGGCAGGAAA TTACAACGGA CGGTGGATCA 
GGTACTGGCG GTGATGAAGC TGGCGAAGCG GCAGATCCCG TAGAAAACGG AAATTTCACT 
GTCCCTGATA ATATACAGCC AGGTATTTAC TATGACATCC CTAACGAGGC GTATCACGCT 
GGCCCCGGCG TCAGTAAATC ACAGCTTGAC GATATCGCAG ACACACCAGC AATTTATCTG 
TGGCGTAAAA ATGCCCCCGT GGACACGGAG AAAACAAAGA CTCTCGATAC AGGAACGGCT 
TTTCACTGCC GGGTACTGGA ACCAGAGGAA TTCAGTAAAC GCTTCATCAT CGCTCCGGAA 
TTTAACCGCC GTACCAGCGC AGGAAAAGAA GAAGAGAAAA CCTTTCTGGA AGAGTGCGCC 
CGGACAGGAA GAACCGTGCT TACGGCAGAA GAAGGCCGGA AAATCGAACT TATGTACCAG 
AGTGTGATGG CGTTAACCGA GTGCATTGCT GGAGAAGTTG ATCAGTGA
 
Protein sequence
MEQDTTEHHP DPQPLENEPP VSQTEAGYQK IRAELHEARK NIPPKNPVDV GKQLAAARGE 
YVEDISDPND PRWVHNNYSA SNQGEKEEVV PEGKQPAAEP EAVTRNADGT FDVSALFPPP 
SNQTEKTEAR TERDGETPKE SNQQETAGDT GQEITTDGGS GTGGDEAGEA ADPVENGNFT 
VPDNIQPGIY YDIPNEAYHA GPGVSKSQLD DIADTPAIYL WRKNAPVDTE KTKTLDTGTA 
FHCRVLEPEE FSKRFIIAPE FNRRTSAGKE EEKTFLEECA RTGRTVLTAE EGRKIELMYQ 
SVMALTECIA GEVDQ